UFO09365.5prime Sequence
1120 bp (1039 high quality bases) assembled on 2011-08-15
> UFO09365.5prime
CAGTCGACATGATCAGCCCGGTAATAACTCGACAAATGGTGCAAATCCTG
CCAAGTGTTATGGTCGGTAGGATAACACTTCCCGATATTATTGAGGATGC
AATCAAGCCCCCAACGGAAGATATTAATTTCGAAGAAAAATCGAATGAGA
ATGAGGTGGAAGATAATACAGAGAAATCGGAAGCGGTTTCTGAATCCGAA
AAAGAGGTAATTGAGGTATCTGAGGAGCCGAAGGAAGAAGAGGTAAAGTA
CGCTTGGAATGCACCCTGCATGATGGTCATCTTCGAGGATGGCGATGTCA
ATTGTGCCCTGCATCACCTGGTCGAATCTCTACAGGATCCCTTTGCCTTA
GATGCGGTTGCCGTGATCTTGGTACAAGAAGCTTTAGCCGAAGAAATCGA
AAACCGAGTAAAAATTCTGATGAAACCCTTGGATGCCAGGGTGGCCAATC
ATCCGTGCTACAAGCGCACTCTGATGAAGATTGACGAACTTAGGCCGAAA
ACTATAATAGGTCCTTCAGATCGTGTCTTACCCGATGCCACGCCCATAAT
GGTGCGGGACATACCACACAAATTTCTGGGCGATGGACCCACTGGCATTA
TAACCATGCATATTTTTCGCACCCCTTTCGAAGCCACTCAGATATATAGA
AAGGAATATCCCCTACCAATCGCATCGGTTAGTATATGGAATGAGCGGGT
TTCGAGTGTTTACGATGTAATTGGCATGATGAATCTACTCGATACCTTTA
AGATCAACTGTTTCACGGTCGATATGGAGCCCATTAAGCGGGCATTCGAG
CTAAGGAAGTATAGTGCTTGTATACATCGTGGTTATCACTATGAAACCCT
GCCCATAAATGGCGAGAGAAAGATTATCATATATCCAGTTGGAACTATAT
TTGGCAATGCAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGTCATAATCATAATCATAATCATATCATAATCACACTAGCCTAGAGAT
CCTGGTCATGACTAGTGCTGATTCTCACCAATAAAAAAACCGCCCGGGCG
GCCACCGACGATCTGAAACATCCCAGATGGAGTTCTGAAGTCATACTGAA
TCTATCAAAGGATTCCAGGC
UFO09365.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:55:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12516-RB | 975 | CG12516-RB | 39..938 | 9..908 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:55:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28303668..28304567 | 908..9 | 4500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:55:51 has no hits.
UFO09365.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:44:26 Download gff for
UFO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12516-RB | 35..943 | 1..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:37 Download gff for
UFO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12516-RB | 35..943 | 1..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:52 Download gff for
UFO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12516-RB | 35..943 | 1..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:52 Download gff for
UFO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28303668..28304571 | 1..908 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:37 Download gff for
UFO09365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24129390..24130293 | 1..908 | 99 | | Minus |
