UFO09371.5prime Sequence
1055 bp (985 high quality bases) assembled on 2011-08-15
> UFO09371.5prime
CAGTCGACATGGGGTTTTTTTTGTTTAAAAACATAGTTCGCAATTCTGAT
AAATTATTCGGAAATAAAACTCCAACTAGAGTTTCGCTATTGTCCAGATT
TTGTGGCACTTCCTTGGCTGGTAAAATGGAGAAGGTTTATTTGAGAAATG
CAAGTGATACCAAAGAATTGGACATTGTGTTTCGCTTTGTGAATGAGAAT
TTGAAAATAAACCGGGAATTCAATTTCCGTCGCCAGATGAATGAGCCCAT
TGATGCGATATTGGCCAGGATTCAGAGTAATATTATTGGCAGGCTTGCAA
AGTCCTGCAAAAAATCAAAAATCAAACCGCCGGCAGAAATCAATGTTAAA
CTTCTGAGTGACAAATATGGTGAAAAATTCAATGAATTAACATTTGAGGA
TCTAGTCGTCACCCAAGATATCAGCAATGTAAAACTGCAGGTATTAGATA
CGGTCTACGATTTGGTGTTCAATCCACCGTGGATTTCATCCCTAAAATTT
TTGCCCTCATGCATATTGGCAGGATTTGTAATATACCCCACCAATGTTCA
GATACAATTCGGAGAACGTCAGTTCAGCAAAGCAGTTTGGTTCAAGGCCA
AAAAGCCCACAGACACCGATTGGGAGGTGTGCGGAGAAGGATTTCAATAT
CTAGTGACTCCTGAGGATATTGGTTACCATTTGAAGTTCGTGGTGACGCC
GGGTAATGCACTGGGAATGACGGGTCCTGTGGTGGAGAAGATAACCAACT
CTGCAGTGCAGGAATCTCCCGGGCGTTGTCCATTCCAAGATCGCCAAAGG
CACACCACGAATTCTTTGAGCGAATCGAATGAATTCGTGTGGTGTCTTAC
AATTTGTTGGCCGATTTATATGCCAGTAGTGACTATGCCGGTAGCACTCT
GTTCTCCTATTGCCCGGCAAGTATCTGCAAATAGACTATAGGAAGCCACT
GTTCATCATCGAAGATCATCGGGTTATAACCTCGAAAATTCTCTGTCTTC
AGAAGTCGATCAGCGAAATTTTGATTTTGAATTTTAGGAAATCCTAGAAA
ACAAC
UFO09371.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31759-RD | 2242 | CG31759-RD | 333..1373 | 9..1049 | 4905 | 98.4 | Plus |
| CG31759-RC | 2192 | CG31759-RC | 181..1221 | 9..1049 | 4905 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12208099..12209139 | 9..1049 | 4755 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:49:27 has no hits.
UFO09371.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:35 Download gff for
UFO09371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31759-RD | 410..1459 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:36 Download gff for
UFO09371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31759-RC | 176..1225 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:28 Download gff for
UFO09371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31759-RC | 176..1225 | 1..1052 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:28 Download gff for
UFO09371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12208094..12209143 | 1..1052 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:36 Download gff for
UFO09371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12208094..12209143 | 1..1052 | 97 | | Plus |
