UFO09382.5prime Sequence
1140 bp (1029 high quality bases) assembled on 2011-08-15
> UFO09382.5prime
CAGTCGACATGACAGAACTGAGCATCACTGGCCAACAGGTGATGCCTCCG
CCCGCTTGTACACCCCCGGAGCCCTTCCGCATCACAACGAACGCCCCGCA
CCAGATGAACGATGCCAGTTTGACGCCGGGACGCAGGAAGCTCCAGAAGT
GGCTGGGTCGAGTTCTGCGGATCGTGATTACGGACGGACGCGTGCTGGTG
GGATTCTTCAACTGCACGGACCGCGACGCCAACATCGTGCTGTCCATGTG
CGCCGAGTACTTGGTGGAGGGCCAGGAGCCGCGCCTGCTGGGCAACGTCA
TGGTTCCCGGCCAGCACATAGTCTCCCTAAGCATCGACGAGCCGGATCCG
CAGTCCAGCCTGCTGGTGCAAGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAA
TAAACCCTTTAGGGAAATAGGCCAGGTTTCACCGTACACGCCACATCTTG
CGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCAGAGC
GATGAAAACGTTTCAGTTTGCTCATGGAAAACGTGTACCAGGTGAAACTA
TCCATAATCACCAGCTCACGTCTTTCATTGCCTACGAATTCCGGATGAGC
ATCCATCAGGCGGCAAGAATGTGAATAAAGCGGATAAACTTTGGCTAATT
TTCTTACGGCCTAAGGCGTAATCCAGCGACGCCTGGTTAG
UFO09382.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:50:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31950-RB | 658 | CG31950-RB | 249..612 | 8..371 | 1730 | 98.4 | Plus |
| CG31950-RA | 482 | CG31950-RA | 73..436 | 8..371 | 1730 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2878592..2878955 | 8..371 | 1730 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:50:13 has no hits.
UFO09382.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:41 Download gff for
UFO09382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31950-RA | 73..436 | 8..371 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:59 Download gff for
UFO09382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31950-RA | 73..436 | 8..371 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:45 Download gff for
UFO09382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31950-RA | 73..436 | 8..371 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:45 Download gff for
UFO09382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2878592..2878955 | 8..371 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:59 Download gff for
UFO09382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2878592..2878955 | 8..371 | 98 | == | Plus |
