UFO09383.5prime Sequence
1132 bp (1030 high quality bases) assembled on 2011-08-15
> UFO09383.5prime
CAGTCGACATGAATTCAAGTTTCAACAGCGAGCAGTTGGACACCGACCGC
GATGGACTGCAAAAAATTCTGGCCCGATCTCTCAAGGAACCCATTCTTGG
CAAGCACTTTGCCCTGCCTGGCCGCATAGAGCAGAGTCCACCCATCGAAC
TGGACACCAGCCAAAGCTACATTGCCGTCTACACTCATCTCAAAGTGCAC
GCCACCATGATGCCGGAGAGATTGCCCACGCCGGAGGCAATCGGACGAAT
ACAGGCGGAGAACTTGGAGGCAGCGCCCAAGGCACGAAGTTCAAAGACCC
GCTTGGATCCCTGCTCAAATATAAATGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGC
CCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAA
TCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATT
CTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCA
CATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCAC
TCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAA
GGTGAACACTATCCCAATATCACCAGCTCACCGTCTTTCATTGCCATACG
AAATTCCCGGATGAAGCATTCATCAGGCCGGCCAAAATGGTGATAAGGCC
GGATAAAACCTTGTGCCTTATTTTTCTTACGTCCTTAAAAGGGCCGTAAT
TCAGCTGACCGGCTTGTATAGTACTGACACTG
UFO09383.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:50:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34164-RC | 474 | CG34164-RC | 116..433 | 9..326 | 1575 | 99.7 | Plus |
| CG34164-RB | 1771 | CG34164-RB | 1413..1730 | 9..326 | 1575 | 99.7 | Plus |
| RpL7-like-RB | 1771 | CG5317-RB | 1413..1730 | 9..326 | 1575 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12057893..12058210 | 9..326 | 1575 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:50:17 has no hits.
UFO09383.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:42 Download gff for
UFO09383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL7-like-RB | 1433..1760 | 1..334 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:00 Download gff for
UFO09383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL7-like-RB | 1409..1736 | 1..334 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:47 Download gff for
UFO09383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL7-like-RB | 1409..1736 | 1..334 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:47 Download gff for
UFO09383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12057889..12058210 | 1..326 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:00 Download gff for
UFO09383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12057889..12058210 | 1..326 | 98 | == | Plus |
