UFO09389.5prime Sequence
1111 bp (1009 high quality bases) assembled on 2011-08-15
> UFO09389.5prime
CAGTCGACATGGCGGGAACCAAGGTGCTGCGCTCCCTGCTGCACGAATTG
CGCCAGGCATCTCCAAATGGCTGCATCAAGGACTCTCTGGCCGCGCGCTA
CATTTTGGCGCAATACAAGAAGTTCGCCACCACGGAGCAACAATTCTGCA
AGGCGCGCAACGAAGCGACTTTCCTGGGTCAAACCTACCTGACCTACCTA
GCCAGCCAGCGCCGGTACTTGGAGCTCTACAAGGAATATCACGGAAGGGG
CGAGAGATCCGTAAGGGATACCGCCGATTTGGTGGGCTTCAAGCTGCCCT
CGGATCCCAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAA
CTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTT
AGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATA
TGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAA
ACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGACACTATCCC
ATATCACCAGCTCACCGTCTTTCATTGCATACGAAATCCGATGAGCATTC
ATCAGGCGGGCAGATTGTGAATAACGCCGATAAACTTGGTGCTTATTTTT
CTTTACGTCTTAAAGCGTAATATCAGCTGACGGTCTGGTTATAGTAACTT
GACACTGACTG
UFO09389.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:50:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34117-RA | 428 | CG34117-RA | 59..361 | 9..311 | 1500 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9399637..9399939 | 311..9 | 1500 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:50:36 has no hits.
UFO09389.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:45 Download gff for
UFO09389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34117-RA | 47..363 | 1..318 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:08 Download gff for
UFO09389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34117-RA | 51..367 | 1..318 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:52 Download gff for
UFO09389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34117-RA | 51..367 | 1..318 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:52 Download gff for
UFO09389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9399637..9399941 | 6..311 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:08 Download gff for
UFO09389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5225359..5225663 | 6..311 | 99 | | Minus |
