UFO09395.5prime Sequence
1109 bp (1026 high quality bases) assembled on 2011-08-15
> UFO09395.5prime
CAGTCGACATGAAGAAGTCCGGGGACTTTCTCTCCCTGCTCAACAATCGC
GACCTGCTGAAGACTCCGTCCGGCAACTCCATTGTGAACTTCCTGGTGAA
ACCGATGAGCGTGGAAATGAACACGGCGGACAATCTGATCACGGGTGCCA
GGCGCCAGCGAATGATGGAGCTCTTCCAGGAGGACCGCGCCTGGGAGGCC
GCCGAGTTGTCCCGCTTCGGACTGAGCTGCATCAAGGCCCCGGACTGCTA
TCCCTGCTGCACTCCTTTCGAGTGCTCCAAGGCCAAGTTCGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATAT
TGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAG
ACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTC
ACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAAT
CGTCGTGGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGA
AAACGGTGTAACAAGGTGACACTATCCCATATCACCAGCTCACCGTCTTT
CATGCCATACGAAATTCCGGATGAGCATCATCAGCGGGCAGATGTGAATA
AAGGCGATAACTGTGCTTATTTTCTTTACGTCTTAAAGCGTAATATCAGC
TGACGGTCTGATTTAGTTACATGAGCACTGAACTGGAATGCTCAAGTTTC
TTACGATGC
UFO09395.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34210-RA | 565 | CG34210-RA | 106..387 | 9..290 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23351705..23351966 | 29..290 | 1310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:51:04 has no hits.
UFO09395.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:48 Download gff for
UFO09395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34210-RA | 34..321 | 1..290 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:20 Download gff for
UFO09395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34210-RA | 100..387 | 1..290 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:03 Download gff for
UFO09395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34210-RA | 100..387 | 1..290 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:03 Download gff for
UFO09395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23351705..23351966 | 29..290 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:20 Download gff for
UFO09395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19239228..19239489 | 29..290 | 100 | == | Plus |
