UFO09396.5prime Sequence
1143 bp (1021 high quality bases) assembled on 2011-08-15
> UFO09396.5prime
CAGTCGACATGAAGGTTATCTACAACACCCTGTTCAAGCGCACCTCCACC
TACGCCGTGGCCATCATCGCGTCGGCCTTTTTCTTCGAGCGCGCTCTCGA
TGTCACGTCGGTTGCGATTTTCGAGGGCATCAACAAAGGCAAACTCTGGA
AGGACAGGAAGGGCAAATACGAAGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTG
AATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCA
TGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCA
AAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTC
AATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACAT
CTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTC
CAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGG
GTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAA
ATTCCGGATGAGCATTCATCAGCGGGCAAGAATGTGAATAAAGGCCGGAT
AAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTATATCCAG
CTGAACGGTCTGGGTTATAGGTACATTGAGCACTGACTGAAATGCCTCAA
ATGTTTCTTTACGATGCATTGGAAAATATCAACCGGTGCAATATCCAGTG
ATTTTTTTTCTCCATTTTAGCCTTCCTAGCCTCCTGAAAGAATCCATAAC
CTCTCGGGAAGCATAACTATCGGAGTATCAGGAATCCCAAATA
UFO09396.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ox-RA | 331 | CG8764-RA | 99..265 | 7..173 | 805 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12757298..12757431 | 140..7 | 670 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:51:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 742..809 | 123 | 68.1 | Plus |
UFO09396.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:49 Download gff for
UFO09396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ox-RA | 86..265 | 1..181 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:22 Download gff for
UFO09396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ox-RA | 92..271 | 1..181 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:05 Download gff for
UFO09396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ox-RA | 92..271 | 1..181 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:05 Download gff for
UFO09396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12757298..12757436 | 1..140 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:22 Download gff for
UFO09396.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8644803..8644941 | 1..140 | 97 | | Minus |
