UFO09401.5prime Sequence
928 bp (807 high quality bases) assembled on 2011-08-17
> UFO09401.5prime
AGCGGCCTCTGTTTCCAGGAGAAGGCGCCACTGCAGACGAGCCTGGTCAG
CGGACAGGCCAGGACCGAAAAGCAGCAACAGGTGCTGGACGATCCGCTGG
GAAGTGGACGCGGGATTGACGAGCACCTGCTGAAAACCATTGGTAAGGGC
GGCATCAAGCTGGTGATGGCCTCGGGAGCCCCGTCGACCACCCCGAAACC
GTCAGTACAACACCATTACTATTATCCACCAGAGGATCAGCAGCACCCAC
GGCAGTATGGCTATCCACCGCAGTGGTCGCCAGGACCGCCCGCTTATCCG
CCGCCACCGCAGCGTCCTTGGGGGCCACCCCCTCCGCCCGGACCACCGCC
GCCAGGACCTCCTCCTCCGCCGGGACCCTACTACAATCCCTACTACAATG
GCTACAACTACTACGGCGGATATGGCGGCTATGGATATGGGGGCTTTGGA
TATCCCGGCTTTGGCGGCTATTCTGGCTATCCCTACTATCCCTTCTATCG
CTCCTCGACGGCTGGCGAGGTCGATAACCAACTTCCCGGTGCCGATGGAC
TCACTTCCGGCGCCATTCCTGGCGTTTTCCAGGGCAGGGCCGTGCTGTCC
CACCAGAACTTCCTCGACGGCAGAACAACGCTAACGTTGTGCCACTTTAT
CACCTACTCCAAATGGCCAGGGCTGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATATCATAT
CACAACTAGCCTAGAGATCCTGATCATGACTAGTGCTGGATCTCACATAA
AAACGCCCGCGCACGACGTTCTGACAATCCGATGGATTCTGAGTCATTAC
TGATCTATCAACGGATCAACGAGCTCGATTCAATACGCCCCGCCTGCAAT
CACTCGAGTACTGTTGATTCATAAGCAT
UFO09401.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9184-RA | 966 | CG9184-RA | 76..750 | 1..674 | 3320 | 99.6 | Plus |
| CG9184-RB | 876 | CG9184-RB | 217..660 | 232..674 | 2180 | 99.5 | Plus |
| CG9184-RB | 876 | CG9184-RB | 76..217 | 1..142 | 695 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1322008..1322682 | 674..1 | 3295 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:05:58 has no hits.
UFO09401.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:06 Download gff for
UFO09401.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RA | 72..758 | 1..686 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:28 Download gff for
UFO09401.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RA | 76..762 | 1..686 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:53 Download gff for
UFO09401.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RA | 76..762 | 1..686 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:53 Download gff for
UFO09401.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1321988..1322682 | 1..694 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:28 Download gff for
UFO09401.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1321988..1322682 | 1..694 | 98 | | Minus |
