UFO09412.5prime Sequence
1114 bp (990 high quality bases) assembled on 2011-08-17
> UFO09412.5prime
CAGTCGACATGCTTACCGACAGAGTTCTGGCCACCAAGGAGGCGCTAGTG
GTGGCTCTGGGCGACAACTGGGAGCGTTACCGGGCCAACATGAAGAATTG
GTTTCGGAGCCGTTGGACTAAGGAGGAATTCGATGCGGAGTCGCGGAAAA
TCCTAACACCTGACAAACTGCACCTGCACAATCAGTTCCTGCTCGCCCTG
CTCAACAAGATCGACGCCTTTGCTCCCCTGGAGAATCCTCCGGCCGTCCA
GACCAGCAGCAGTAGTGGCAACCGAAGCAAACGGCGCAAAAGAAGTTGCC
GCACCTTCGCCGAACGCCTTAATTTTGAGCTCAGCGACGTCCTGGACTTT
GTAGCCGAGGACAACATGCAAATCATTCGTCCGCCAACCACGATCGGTAT
TCCGTCGGACCAGCAACAGCAACAGCTTCAGTCGCAGCGGTACTGCGCGC
AGGAACTTTTCCTGCCCGACGCGGGATTCATTATGGGACGATTTCTGATC
GGTGCCTGGGAAATCGGACTTGTCTCCGTGGACGACAATGTCGCCGAGTA
CGTTGCCATGGCCGTGCAAGTTCTGCTCAAGGATCTACTATCGGCAATCA
TCAAGAAACGAAAGCACTACAAGACCAGCGGCGAAGGAAACTTTTACTAC
GATGTAGGTGCTCCGTTGCGTGATCCTTCGCTGCGCAACACCGTCACCCG
GCAGAAGGTCGACGACACGCCGCTGGAACTGGACAAAGGAACTGAATACG
GCCATGTTTATGCGGCGACAGAACGAGGATGTGACCTTCCTCTCCGCCTG
CGAAGAAGTCCAACCCACCGAACGCACAGTAATCACCCTCAAGGACTGCC
AACTGGCCTTACGGGATCGCAACCTGATAGGCTCGCATGCCGTCTACTCC
ATAAACATGGAAACGACTCATTATGATGATGCATGCAAGCTTTCTAGACC
ATTCGTTTGGCGCCCGGGCCCAGGTAAGTGGTCATATCATAATCATAATC
ATATCATAATCACAACTAGCCCTAGGAGATCCTTGTCATGACTATGCTTG
CATCCCCACCAATAAAAACCGCCCGGGCGGCACGAGCGTTCTGAACATTC
GAATGAGTTCTGAA
UFO09412.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-1-RB | 1068 | CG31865-RB | 71..994 | 9..934 | 4505 | 99.2 | Plus |
| Ada1-1-RA | 1093 | CG31865-RA | 96..1019 | 9..934 | 4505 | 99.2 | Plus |
| Ada1-2-RA | 1089 | CG31866-RA | 92..1015 | 9..934 | 4475 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11996904..11997703 | 9..809 | 3895 | 99.4 | Plus |
| 2L | 23513712 | 2L | 11992993..11993792 | 9..809 | 3880 | 99.3 | Plus |
| 2L | 23513712 | 2L | 11997768..11997891 | 810..934 | 560 | 98.4 | Plus |
| 2L | 23513712 | 2L | 11993857..11993980 | 810..934 | 545 | 97.6 | Plus |
Blast to na_te.dros performed 2014-11-27 00:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| accord | 7404 | accord ACCORD 7404bp | 6601..6633 | 146..178 | 111 | 81.8 | Plus |
UFO09412.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:05 Download gff for
UFO09412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 94..1026 | 9..946 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:24 Download gff for
UFO09412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 94..1026 | 9..946 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:49 Download gff for
UFO09412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 96..1028 | 9..946 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:49 Download gff for
UFO09412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11996904..11997703 | 9..809 | 99 | -> | Plus |
| 2L | 11997768..11997891 | 810..934 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:24 Download gff for
UFO09412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11996904..11997703 | 9..809 | 99 | -> | Plus |
| arm_2L | 11997768..11997891 | 810..934 | 98 | == | Plus |
