UFO09432.5prime Sequence
1116 bp (1007 high quality bases) assembled on 2011-08-17
> UFO09432.5prime
CAGTCGACATGAGTGAAGCTGCCAATCCAACGCCCTATGATTGCCACATA
GGTGCTGGTATTTACCACAGCATAGCAACGAGTTTTGCAGAACAAAATGT
AGTTGTATCACCACTACTACTGGAAGCCACTCTGTCCCTGCTCTTCCTGG
GATCGGATGGAGCCACCGCCGAGGAGCTGCAGAAACAACTGCGACTGAAG
CAACGTTTTGCCAGCAATGCCAAAATGGCCAATTTCTATGCCGCGGAACT
GGGCAATATCACAACAGATGCAGATACCTTCCTGCAGCTGCAGAATCGTT
TGATGCTGTCATCTGAATCTGGAGTGGCCGATGATTTCCAGAAGATTGCA
CAAACCTATTTCCATGCCACTGCCGAGTGTGTTGATCTGGAGCAAACGGA
GAAACTGCGTCGCCACATCAGCGAACAGATCCTGGCCAGCGTTGGAGGCG
GCAGCTGGAAGGATATTCACGTGGCAGGTGGTTCGTCAGCCAATACCCTG
CTCCTGCTGCTGGCCGCCAATCTGCAGAGCAAGTGGTTCCTGCCCTTCAG
TGCCTACAGAACCGGACTCTATGAGTTTCACAGCGGCAGCCAGGTGAAAT
CGGTGCCCATGCTCTTCGACGACGACATGTTCGTGAAGTTCGCTGAGCTG
AGGGATCTGGATGCGCGTGCCATTGAGCTGCCCTACGAGCACGCCGAGGA
GCTGTCCATGCTGCTCATTCTGCCCAATCAGCGTGGTGGCCTGCAGGAAC
TGGAGAAGCAGCTGCATGACCTGCATTTGGGTGCACTGCAGCAGCGAAAT
GCAGATGGAGGGCGTGCAGGTGTTCCTGCCCAAATTCAGTATCGATTTCG
AGTGCAGTCTGCGGCAGCCGTTGAAACAGCTCGGCTTTGAGGAGATATTT
GCTGCATCGGCGAACTTCAAACATCTGCATGCATCGGCGAATCTGCCCAT
TGCCGATGTTCTCAAGCTGCGCATAAATCTGATGAGTCTGGATCCGGATC
GGACCGGAGTACCAGATGCCACAGAATATAGCCCATGTGGATCAGCATTT
CTCCGCCAGAATCTCCGAGCCTGAACATCATTCTTCTCGCATTCGCAGTG
AGGGACCATCTGATGG
UFO09432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn31A-RA | 1428 | CG4804-RA | 192..1301 | 9..1102 | 4970 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10062572..10063441 | 9..879 | 4275 | 99.7 | Plus |
| 2L | 23513712 | 2L | 10063499..10063625 | 878..1000 | 490 | 96.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:08:46 has no hits.
UFO09432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:17 Download gff for
UFO09432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn31A-RA | 130..1166 | 1..1030 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:45 Download gff for
UFO09432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn31A-RA | 185..1221 | 1..1030 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:57 Download gff for
UFO09432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn31A-RA | 185..1221 | 1..1030 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:57 Download gff for
UFO09432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10062565..10063441 | 1..879 | 99 | -> | Plus |
| 2L | 10063501..10063625 | 880..1000 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:45 Download gff for
UFO09432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10062565..10063441 | 1..879 | 99 | -> | Plus |
| arm_2L | 10063501..10063625 | 880..1000 | 96 | == | Plus |
