UFO09438.5prime Sequence
1102 bp (1002 high quality bases) assembled on 2011-08-17
> UFO09438.5prime
CAGTCGACATGTACCTCAATGAGAATAAAAATCGTATATGGGCGTGTGCC
CTGTGTTTTTTTTTATCACTGATCTGCGTGCAAGGACGTGTTGGTCTGGG
ACCTGGAGTACAGGAATGGGACTATGTGGAAGTTCGGAAGGGCGCTCACC
TCTTTTACTGGCTTCTATACACCACTGCCAATGTATCTCATTTCATAGAG
AGGCCGCTGGTAATCTGGCTGCAAGGGGGACCCGGTGTTGCATCCACCGG
CAGCGGGATATTTGAGCAGCTTGGACCCATCGACATCGAGGGCAAAACGC
GGGAAAGCAGTTGGTTGAAGCACGTGAATGTTCTTTTTGTGGACAGTCCG
GTGGGCACGGGATTCGCTTACGTTGAGCATCACAGCCTCTATGCCAGAAA
CAACAGGCAGATAGCCCTCGATCTTGTCCAGTTGATGAAGCAGTTTCTTA
CGAAGTATCCCGATTTCCGAAAGGTGCCCCTGCATATATTCTCCGAGAGC
TATGGCGGAAAAATGGCTCCCGAATTCGCGCTGGAATTGCATTTGGCGAA
GAAAGTAGGCGAATTAGAGTGCGATCTGAAATCCGTGGTAGTAGGCAATC
CATGGACCTCTCCACTGGACAGTATTCTGTCCTATGCCCCCTTTCTGCTC
CAATCGGGCATTGTGGATGATGACGGTTATCGTCGAATATCGCGACTGGC
CGGCGAGTTAGCTGCACTTGTCTATGGCGGAAAGTGGTTACGCGCCTTGA
TGAAGCGACCGAAGTTCATGATGAGATCTCCGCCAGTGCGGGCGGAGTCT
TCATCTACAACACCCAGCGGCGGGTCACGTGGACGAGGTCTACCGGTACG
GCGAAGATCCGCAAATGAGCGACTTTATGCGATCCAATGTGACTAAGCAC
TGGGGGCTAGGCAATATGCCCGTGTGGATGGAACAAAACTCGACAGTCTT
CGACGACTCAGTCAGATATTTTAGCAGCGATCAATAGTACAATGCTGAAA
ACCGATACGTGAGATTATTCGCATCGACGGTGTGGTATATTTTGTCTTGA
CTGTTCTGAACTTATGTGTGGCCACACACCGCGACCGATTACTCTGTACT
CG
UFO09438.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31823-RA | 1403 | CG31823-RA | 79..1046 | 9..972 | 4680 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15899321..15900206 | 965..83 | 4175 | 98.9 | Minus |
| 2L | 23513712 | 2L | 15900370..15900446 | 85..9 | 385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:09:26 has no hits.
UFO09438.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:19 Download gff for
UFO09438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31823-RA | 35..1025 | 1..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:01 Download gff for
UFO09438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31823-RA | 72..1062 | 1..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:12 Download gff for
UFO09438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31823-RA | 72..1062 | 1..984 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:12 Download gff for
UFO09438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15899334..15900204 | 85..953 | 99 | <- | Minus |
| 2L | 15900371..15900453 | 1..84 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:01 Download gff for
UFO09438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15899334..15900204 | 85..953 | 99 | <- | Minus |
| arm_2L | 15900371..15900453 | 1..84 | 95 | | Minus |
