UFO09441.5prime Sequence
1054 bp (986 high quality bases) assembled on 2011-08-17
> UFO09441.5prime
CAGTCGACATGTGCAAGTGTCTGGTCGGAAACGTTGCCTGCTGCTGCTGC
AGTTGTGCAATTAGTGTGCTTGTTTCAATCATCAGTGGATTGCTGGTGGT
CGGCATTGTGGTCGGATTGGCCGTCTACTTTCTTGTCTACTACGAACCGG
AGGATGAGGTTACCAAGTTCACCAATAAATTAGCCGAAAGTGTACAGTCG
GGATATGGCAAAATTAAGGATGTCATAAGCAAATTAAATGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCA
CCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCCGGAATC
GTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGA
AAACGGTGTAACAAGGGTGACACTATCCCATATTCACCAGCTCACCGTCT
TTCATTGCCATACGAAATTCCGATGAGCATTCATCAGCGGGCAGAAATGG
GAATAAAGGCGGAAAAACCTTGGTGCTTATTTTTTTTACCGTCTTCAAAA
GCGTAAATTCCACCTGACCGGCTGGTATAGGGTCTTGACAAATGGACGAT
AGCT
UFO09441.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42394-RC | 634 | CG42394-RC | 94..326 | 7..239 | 1165 | 100 | Plus |
| CG42394-RB | 503 | CG42394-RB | 23..255 | 7..239 | 1165 | 100 | Plus |
| CG42394-RD | 582 | CG42394-RD | 94..326 | 7..239 | 1165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10851284..10851480 | 43..239 | 985 | 100 | Plus |
| 3R | 32079331 | 3R | 10849983..10850019 | 7..43 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:09:46 has no hits.
UFO09441.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:21 Download gff for
UFO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42394-RC | 91..333 | 1..245 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:09 Download gff for
UFO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42394-RA | 18..260 | 1..245 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:21 Download gff for
UFO09441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42394-RD | 89..331 | 1..245 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 01:00:21 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:13:09 has no hits.
