UFO09446.5prime Sequence
1103 bp (973 high quality bases) assembled on 2011-08-17
> UFO09446.5prime
CAGTCGACATGAAGTTCTTCATTTTGATTTCATTCTTACTGGTCTGTCAA
GGGTCCAACGAAGAGGAGGATAACATAATAGCCGAGTTGTGCTTCAATCC
GAATTCTGGACCTCCTTGCCAGAAATTAAAAACATATTATTGGGATAAGG
AAAAGAATCGATGCGTGCTCTCTCGGTATTTAATGCAGCCTTGTGGTTTC
TTTGACACAATAGACATGTGCGATAAAATATGCACCAAGGAATCGTGGAC
AATATCTCATTTGGAAGTATATGTTCGAAATATGCCTGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCAT
AATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGA
ACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGT
CCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGT
ACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACG
GCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGT
ATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGG
CCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACG
AAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTTCAC
CGTAACACCGCCACATCTTGCGAATATATGTGTGAAACTGCCGGAAATCG
TCGGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGA
AAACCGGTGTACAAGGGGGAAACTATCCCATTATCACCAGCTCACCGTCT
TTCATGGCATACGAATTCCGGATGAGCATTCATCAGCGGGCAGGATGTGA
ATAAGGCGGATAAACTTGGTGCTTATTTTTTCTTACGGTCTTAAAGGCCG
TATATCCAGCTTGACCGTCTGGCTTAAGGTCTGGACCACCTGACTGATGC
CTC
UFO09446.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp33A1-RA | 359 | CG42472-RA | 20..302 | 5..287 | 1400 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11754142..11754345 | 287..84 | 1020 | 100 | Minus |
| 2L | 23513712 | 2L | 11754404..11754483 | 84..5 | 385 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:08:56 has no hits.
UFO09446.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:17 Download gff for
UFO09446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp33A1-RA | 17..305 | 1..291 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:12:48 Download gff for
UFO09446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp33A1-RA | 17..305 | 1..291 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:01 Download gff for
UFO09446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp33A1-RA | 17..305 | 1..291 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:01 Download gff for
UFO09446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11754142..11754344 | 85..287 | 100 | <- | Minus |
| 2L | 11754404..11754486 | 1..84 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:12:48 Download gff for
UFO09446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11754142..11754344 | 85..287 | 100 | <- | Minus |
| arm_2L | 11754404..11754486 | 1..84 | 96 | | Minus |
