UFO09457.5prime Sequence
1121 bp (1008 high quality bases) assembled on 2011-08-17
> UFO09457.5prime
CAGTCGACATGAGGAAATCACTACTGATCGTTGGCTCCCTCCTGGTGACC
ATCTTTCTGGCCCATCTGCCAGTTGGTCTAGCCGTCTCGTGTGCCGATGA
TCCCACCGATACGGCTTGCATCGATTGCACAGATACCGCGAATGCAGCTG
AAGCCGATTGTACCACAACCACGGCTGCTCCGGAGGTAACCACAGCTGCC
GCAGAGGTAACCACAGCGGCCAGTGCCGATGGAGAAACCACCACCGCAGC
CGCTTCGGCCACCGACACGACCACCGCCTCATCCGGAGGCAGTGGCAAGA
AGCGCGTGAGGAGGACCTTCAGGCGTAAGGTGAGCCGCCCCAGGAAGATC
AAGAAGAGGAGGAGCAACCGAGGCAGGAACAATAGGAGGAGCCAAAACTC
GGGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAA
GAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCC
AGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAA
TACGCCAGGTTTTCACCGTAACACGCCACATCTTGCGATATATGTGTAGA
AACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTCAGT
TTGCTCATGGAACCGTGTAACAGGTGACACTATTCCCATATCACAGCTCA
CGTTCTTTCATTGCATAGCGAAATCGGATGACATTCATCAGCGTCAGATG
AATTAGCGATAACTGGCTAAT
UFO09457.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13135-RC | 643 | CG13135-RC | 31..428 | 7..404 | 1990 | 100 | Plus |
| CG13135-RA | 576 | CG13135-RA | 31..428 | 7..404 | 1990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10122344..10122741 | 404..7 | 1990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:11:25 has no hits.
UFO09457.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:27 Download gff for
UFO09457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13135-RA | 26..433 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:54 Download gff for
UFO09457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13135-RA | 26..433 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:00 Download gff for
UFO09457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13135-RA | 26..433 | 1..410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:00 Download gff for
UFO09457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10122344..10122746 | 1..404 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:54 Download gff for
UFO09457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10122344..10122746 | 1..404 | 99 | | Minus |
