UFO09459.5prime Sequence
1174 bp (973 high quality bases) assembled on 2011-08-17
> UFO09459.5prime
CAGTCGACATGACGCTCCACAAGCTGCCCGCCAAGTGCATTCTGCTCGTG
GTGTTGCTGCTCCTGCTGGACTCCAGCCTGGCCAGGTCGCAACAGTTCTT
CGTCGCCGAGGATGTGATAACAGGAACGGCAACTGAAACGGGAACTGCAG
CTGCAAGCAGAACCGTATTTGGTGATGATCAATTGCCCATCAACGATCCA
TCGGATCTAAGTGCTGGTTTAAATTTGGCGCCCGTTGGCAGTCTGATTGC
GGCAGCAGCGAATGCCGTACCCCCTGCCCCTGTTCAATTTATTCGCACGG
CCATGAACAGCGGGCTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC
ATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGC
CAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGA
AAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTG
GTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATATCAATAAAC
CCTTTAGGGAAATGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAT
ATATGTGTAGAAACTGCCGGAATCGTCGTGGTATTCACTCAGAGCGATGA
AACGTTTCAGTTTGCTCATGGAAACGGTGTACAAGGGTGACACTATCCCA
TATCACAGCTCACCGTCTTTCATTGTGTACGAATTCCGGATGAACATCAT
CAAGCGGGCAAAATGTGAATAAGGCCGGATAAACCTTGTGCTTATTTTTC
TTTACGTCTTTAAAGGCGTAATTCCACCTGACGCTCTGTAAGTTACTTGA
GACACCGGACTGAATGTCTCAATGTTCTTCATGCATGATTTCACGTGTTA
TCAGGATTTTCATAGTCTTATCTG
UFO09459.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14406-RB | 375 | CG14406-RB | 27..335 | 9..317 | 1545 | 100 | Plus |
| CG14406-RA | 667 | CG14406-RA | 27..335 | 9..317 | 1545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14910624..14910819 | 204..9 | 980 | 100 | Minus |
| X | 23542271 | X | 14910205..14910318 | 317..204 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:10:23 has no hits.
UFO09459.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:23 Download gff for
UFO09459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14406-RA | 21..335 | 1..317 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:28 Download gff for
UFO09459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14406-RA | 21..335 | 1..317 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:35 Download gff for
UFO09459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14406-RA | 21..335 | 1..317 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:35 Download gff for
UFO09459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14910205..14910317 | 205..317 | 100 | <- | Minus |
| X | 14910624..14910825 | 1..204 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:28 Download gff for
UFO09459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14804238..14804350 | 205..317 | 100 | <- | Minus |
| arm_X | 14804657..14804858 | 1..204 | 98 | | Minus |
