Clone UFO09460 Report

Search the DGRC for UFO09460

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:94
Well:60
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG12984-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09460.5prime Sequence

824 bp (726 high quality bases) assembled on 2011-08-17

> UFO09460.5prime
CAGTCGACATGAATGTGGACAAAGCCAGAGACGAGATGATTGAGATGTCC
GAGCAGGTGTGGAAGGATGCGGAGCAGTGGCAAAGAGGTATCCACAATGG
TCAGGCGGTCATGAAGCAGATCAAGGCCATAAATCTTAAGCTCTTCAGCA
CCGAGAATAGGCTGAACAACGCGGACTCGCGTAAGGAGCTCCAGGCCACA
GGGAAACGGATCAACCACTTGTACCAATGCCTCCAACGACCTCTCGCCAC
GATAGGCAACATTTTAAGGACCCTGACCGGTATCAGGGACAACACTGCCA
GGATGTTGAGCCGCTTGACCATATTCTTGGACGATGAAACACTGGCGAAG
CACAGAATACGGCCCAAGCTCGAGAGTTCCAAGCTTCTGAAGATGCTGCA
GTTCCTAAGCCACCGTTACGATACCGAATGGGAGGTCAAGGAAATGGTCG
TGAACGAATTGGAGAGAATCAGCAACTCCTATGATCTGGATCTTGCAATG
GCGTGCTGGAGCACTTGCAGTCACGCAGGAGGTCCAGAGTTCGCAAAGAT
GATGCGCGAGTATTACTGGATCATTGATCGCCGGCAACCTTTTGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGGGTCATAATCATA
ATCATATCTATTACACACAGACGCGAGGGCCAACGGCATAACAGCAGAGA
AGAGATCCCCAGTATGGCAGAACGCCGTCGGAGGAAGCGGATCAGATGAG
TCATGGGCTAGGATAAGATGTCTAGAGTGGTGGGATAGCCTGCTGCCCTT
TTTTTTTTCATCAACGCTCGCTGT

UFO09460.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12984-RA 824 CG12984-RA 42..628 7..593 2935 100 Plus
CG12984-RB 421 CG12984-RB 86..225 454..593 700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20991714..20992160 7..453 2235 100 Plus
3L 28110227 3L 20992595..20992734 454..593 700 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:10:33 has no hits.

UFO09460.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:24 Download gff for UFO09460.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12984-RA 33..637 1..604 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:32 Download gff for UFO09460.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12984-RA 33..637 1..604 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:40 Download gff for UFO09460.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12984-RA 33..637 1..604 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:40 Download gff for UFO09460.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20991705..20992160 1..453 99 -> Plus
3L 20992595..20992743 454..604 96 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:32 Download gff for UFO09460.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20984805..20985260 1..453 99 -> Plus
arm_3L 20985695..20985843 454..604 96 == Plus