UFO09460.5prime Sequence
824 bp (726 high quality bases) assembled on 2011-08-17
> UFO09460.5prime
CAGTCGACATGAATGTGGACAAAGCCAGAGACGAGATGATTGAGATGTCC
GAGCAGGTGTGGAAGGATGCGGAGCAGTGGCAAAGAGGTATCCACAATGG
TCAGGCGGTCATGAAGCAGATCAAGGCCATAAATCTTAAGCTCTTCAGCA
CCGAGAATAGGCTGAACAACGCGGACTCGCGTAAGGAGCTCCAGGCCACA
GGGAAACGGATCAACCACTTGTACCAATGCCTCCAACGACCTCTCGCCAC
GATAGGCAACATTTTAAGGACCCTGACCGGTATCAGGGACAACACTGCCA
GGATGTTGAGCCGCTTGACCATATTCTTGGACGATGAAACACTGGCGAAG
CACAGAATACGGCCCAAGCTCGAGAGTTCCAAGCTTCTGAAGATGCTGCA
GTTCCTAAGCCACCGTTACGATACCGAATGGGAGGTCAAGGAAATGGTCG
TGAACGAATTGGAGAGAATCAGCAACTCCTATGATCTGGATCTTGCAATG
GCGTGCTGGAGCACTTGCAGTCACGCAGGAGGTCCAGAGTTCGCAAAGAT
GATGCGCGAGTATTACTGGATCATTGATCGCCGGCAACCTTTTGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGGGTCATAATCATA
ATCATATCTATTACACACAGACGCGAGGGCCAACGGCATAACAGCAGAGA
AGAGATCCCCAGTATGGCAGAACGCCGTCGGAGGAAGCGGATCAGATGAG
TCATGGGCTAGGATAAGATGTCTAGAGTGGTGGGATAGCCTGCTGCCCTT
TTTTTTTTCATCAACGCTCGCTGT
UFO09460.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12984-RA | 824 | CG12984-RA | 42..628 | 7..593 | 2935 | 100 | Plus |
CG12984-RB | 421 | CG12984-RB | 86..225 | 454..593 | 700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20991714..20992160 | 7..453 | 2235 | 100 | Plus |
3L | 28110227 | 3L | 20992595..20992734 | 454..593 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:10:33 has no hits.
UFO09460.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:24 Download gff for
UFO09460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12984-RA | 33..637 | 1..604 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:13:32 Download gff for
UFO09460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12984-RA | 33..637 | 1..604 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:40 Download gff for
UFO09460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12984-RA | 33..637 | 1..604 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:40 Download gff for
UFO09460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20991705..20992160 | 1..453 | 99 | -> | Plus |
3L | 20992595..20992743 | 454..604 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:13:32 Download gff for
UFO09460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20984805..20985260 | 1..453 | 99 | -> | Plus |
arm_3L | 20985695..20985843 | 454..604 | 96 | == | Plus |