UFO09461.5prime Sequence
1133 bp (971 high quality bases) assembled on 2011-08-17
> UFO09461.5prime
CAGTCGACATGGCGTTAAAGATGAATCAATACCAGAACCAGGTCAAGATA
AACTACGTGCAACAATATGTGGGTAGGGTGGCTGGTCCCCTAGTCGAGCC
CATTTTCCCCGTGCCGCAAATGTCATCGGCAACCCTACGAGTCCGTCGAG
CTGTCGTCGAATCCTATCGCGGACCCCAAATTGCTCCCGATGATGCCATG
CTCCCGATGCCGCCCCACAACAAGGCTCAAAATATGTCTGAGATTCTGCA
CGACCTTCAATTCAAGCTGAAAGATTTCAAGCTGTGGAATCAAGTCATTC
GTCTTCTGAAGAAACGGGTCGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGG
TGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAA
CTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAAT
AAACCCCTTTAAGGAAAATAGGCCAGGTTTTCACCGTAACACGCCACATC
TTGCGAATATATGTGTAGAACTGCCGGAATCGTCGTGGTATTCACTCCAG
AGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGGGTAACAAGGGGT
GAACACTATCCCATATCACCAGCTCACCGTTCTTTCATTGCCATACGAAT
TCCGGGATGACCATTCATCCAGGCGGGGCAGGATTGTGATACGGCCGGGA
TTAAAACTTGGTGCTTATTTTTCTTTACGGTCTTTAAACGGCCGGTAATT
ATCAGGCGTGACCGGTCTGGTTTATAGGGTTAC
UFO09461.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15034-RB | 1248 | CG15034-RB | 215..527 | 8..320 | 1565 | 100 | Plus |
| CG15034-RA | 794 | CG15034-RA | 215..527 | 8..320 | 1565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7346980..7347292 | 320..8 | 1565 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:11:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 1360 | 3409 | 1360 1360 3409bp | 720..766 | 778..825 | 111 | 72.9 | Plus |
UFO09461.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:29 Download gff for
UFO09461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15034-RA | 208..527 | 1..320 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:07 Download gff for
UFO09461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15034-RA | 208..527 | 1..320 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:11 Download gff for
UFO09461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15034-RA | 208..527 | 1..320 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:11 Download gff for
UFO09461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7346980..7347295 | 1..320 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:07 Download gff for
UFO09461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7241013..7241328 | 1..320 | 98 | | Minus |
