UFO09465.5prime Sequence
1141 bp (1007 high quality bases) assembled on 2011-08-17
> UFO09465.5prime
CAGTCGACATGTCGACGTTACCCTTTTTGCTGAGCGTCGCCGACGAGCTG
GACAACATACACTCACAGTCCTACATGGATGACTTTGGCTTGGGCTTCCA
TCCGCACCGCCAGTACTATCGCACACCCACCATTCAGTTGTCCCTGCCCG
CCAGCACCGACTGGACGGGATCGGGTCGGGACTGGTCCCAGACAGCGGGC
AACAGGCATACTCGCTACCGCAGCTATAAGTTTTACGATGACTCACAGAA
CAATCTGGAGGAGGAGGAGCCGCCCGTGGAGGATCCTCAACCCATTGAAC
AGATGAAGTTGCCACAGCAGTTGGTCCAGCAGACCAACCAGACGATATCG
GATCCCCAGCAACCGACGAGTGCAACTGCCACTGCAGCCACAACTCGCAA
GGGACTGGGCATGGTCAACTCCCACTCGCATGATGTGGGTGTTGGTGGTC
TGGGCCTGAATCTCAAAGCTGACGAGGATGAGGACGATGAGAACATCGAT
CGCACGGTGCGCATGTATAATTTGTCCAAGAAGTGCTGCAAGAACTACTA
TCGGCACGCCTTGGAGACCGGACCCGGCGCCAGTGGCAAGGTCAAGTGCA
GCAATGCGCGCTCCGAGAGCCATAAGTCCAGCTCCAGTTCGGAGGAAAGC
CTCCAGAAGATACCCTCGCCCATAGAGTTCCTCACCTGCTTTCTGGTGAA
GAAGTCGCGCACCCCCAAGGCAAATGTGCCAGTTGGGCAGCCGCTGAAGA
AGACAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGAAATCAATTACCGCCCGG
CCCTGCCACTCATCGAGTACTGTTGTATCATTAGCATTCTTGCGACTGGA
AGCCATCACAAAAGGGCATGGATGACCTTGATCGGCAGCGGGCATCAGAC
CTGGTCGCCTGGCCTATATATTTGGCCATGGGTGAACCGGG
UFO09465.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13685-RD | 2456 | CG13685-RD | 273..1020 | 8..755 | 3740 | 100 | Plus |
| CG13685-RC | 3209 | CG13685-RC | 273..1020 | 8..755 | 3740 | 100 | Plus |
| CG13685-RB | 2456 | CG13685-RB | 273..1020 | 8..755 | 3740 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7747616..7748363 | 8..755 | 3740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:12:19 has no hits.
UFO09465.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:31 Download gff for
UFO09465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13685-RA | 1..750 | 9..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:20 Download gff for
UFO09465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13685-RA | 266..1020 | 1..755 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:21 Download gff for
UFO09465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13685-RB | 266..1020 | 1..755 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:21 Download gff for
UFO09465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7747609..7748363 | 1..755 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:20 Download gff for
UFO09465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7740709..7741463 | 1..755 | 99 | == | Plus |
