UFO09473.5prime Sequence
1094 bp (970 high quality bases) assembled on 2011-08-17
> UFO09473.5prime
CAGTCGACATGAAGGCTTTCATCGTTCTGGTTGCCCTGGCCTGTGCCGCC
CCAGCTTTCGGTCGCACCATGGACCGTTGCTCCCTGGCCCGCGAGATGTC
CAACCTGGGCGTTCCTCGTGACCAATTGGCTCGTTGGGCCTGTATTGCCG
AGCACGAGTCCTCCTACCGCACCGGAGTGGTTGGTCCCGAGAACTACAAC
GGCTCCAACGACTACGGAATCTTCCAGATCAACGACTACTACTGGTGCGC
TCCTCCCAGCGGTCGCTTCTCCTACAACGAATGCGGATTGAGCTGCAACG
CTCTCCTGACCGACGACATCACCCACTCCGTCCGTTGTGCCCAGAAGGTC
CTCAGCCAGCAGGGATGGTCCGCCTGGTCCACCTGGCACTACTGCAGCGG
ATGGTTGCCGTCCATCGATGACTGCTTCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCAGGGATTGGGCTGAAACGAAAAAACA
TATCTCATAAACCTTAAGGAAATAGGCCAGGTTTCACCGTAACCACGCCA
CATCTTGCGAATTATATGATGTAGAAACTGCGGAATCGGTCTGGTATTCA
CTCCAGAGCGAATGAACGGTTCAGTTGCTCATTGAAACGTGTACCAAGGT
GAACCTATCCCATATCACAGCTCACGTCTTCCATGGCCATACGA
UFO09473.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LysD-RA | 480 | CG9118-RA | 19..439 | 8..428 | 2105 | 100 | Plus |
| LysB-RB | 611 | CG1179-RB | 22..443 | 7..428 | 1885 | 96.7 | Plus |
| LysB-RA | 486 | CG1179-RA | 22..443 | 7..428 | 1885 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1210758..1211178 | 428..8 | 2105 | 100 | Minus |
| 3L | 28110227 | 3L | 1207392..1207813 | 7..428 | 1870 | 96.2 | Plus |
| 3L | 28110227 | 3L | 1212952..1213371 | 9..428 | 1800 | 95.2 | Plus |
| 3L | 28110227 | 3L | 1210484..1210726 | 8..250 | 1020 | 94.7 | Plus |
| 3L | 28110227 | 3L | 1227770..1228191 | 7..428 | 900 | 81.9 | Plus |
| 3L | 28110227 | 3L | 1218286..1218607 | 402..81 | 635 | 79.8 | Minus |
| 3L | 28110227 | 3L | 1194874..1195241 | 427..60 | 625 | 78 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:12:29 has no hits.
UFO09473.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:32 Download gff for
UFO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysD-RA | 9..445 | 1..435 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:23 Download gff for
UFO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysD-RA | 9..445 | 1..435 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:24 Download gff for
UFO09473.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LysD-RA | 9..445 | 1..435 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 01:01:24 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:14:23 has no hits.
