UFO09475.5prime Sequence
1059 bp (925 high quality bases) assembled on 2011-08-17
> UFO09475.5prime
CAGTCGACATGGGTACCTCTGTATTGGCCACGATGTGTGCTGAGCGCCTG
ACCAAGCTCCTCGTCCGCTACTCCCGTGCTCAGCCTCCCGTGGGGCGGAA
TCAGTCCCACTGCGTCGATAATGTGCTAAGTCCTTTGCCAAGGAGCGAAG
CAACTACCGCCTTCCTGAAGCCAATGAACAATGCTGGCCAGGACCATCCC
CCATCGAAGTCGGCCAACAAGTGGCAGCCGATGGGTACCATCACGAGCAT
CGGACAGAGATTCCAGCGTGAGGCCATGGATGAGATTTGTGCCAGGGCCA
AGGACCGCCTGCTGCCAAAGACCGAACCTCGACGCTTGAACTTCTCTAGA
AATCACGCTTTCTTCCCCAACAAATCGAGAGGCCTTGAAGATTGGAAGAA
ACCGGAGGGTGGGCGGTACTCAGCTCCATTTGTCAGCCTATTCCAGGCTC
CGAACTGTCCTAGTCTGCCTAAGAAGTCGTTTTCTCATCCGCTTGCCTTC
GATCGTCAAAAACTGTATCGAGACTGCTATGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTTGG
ATTCTCACCAAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAT
CCAGATTGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAACCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
ATGAAACCTGAATCGCCAGCGGCATCACACCTTGTCGCCTTGCGTATAAA
TATTTGCCCATGGTGAAAAACGGGGGCGAAGAGTTGTCATATTGGCCACG
TTTAAATCAAAACTGGTGAAACTCCACCCAGGGATTGGCCTGAAACGAAA
ACATATTCCCATAACCTTTAAGGGACATAGGCCAGTTCACCGTAAACGCC
CCATCTTGC
UFO09475.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| whip-RA | 860 | CG34218-RA | 182..703 | 9..530 | 2610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8362516..8363037 | 530..9 | 2610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:12:38 has no hits.
UFO09475.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:33 Download gff for
UFO09475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| whip-RA | 174..706 | 1..534 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:28 Download gff for
UFO09475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| whip-RA | 174..706 | 1..534 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:28 Download gff for
UFO09475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| whip-RA | 174..706 | 1..534 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:28 Download gff for
UFO09475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8362516..8363042 | 1..530 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:28 Download gff for
UFO09475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4250021..4250547 | 1..530 | 99 | | Minus |
