UFO09493.5prime Sequence
969 bp (792 high quality bases) assembled on 2011-08-17
> UFO09493.5prime
AGGCCGGTGACAACTTCCTACGCAGTTACGAGAACGAAGAGAACACCAAT
TGACTGGGAGAAAGTTCCGTTCGTGCCGCGGCCGTCGCTCATCTCGGATC
CGGTGACCGCCTTCGGAGTGCGGCGTCCCGATCTCGAGCGGCGCCAGCGG
TCGATCCTCGATCCGATCAATCGGGCCTCCATCAAGCCCGACTACAAGCT
GGCCTACGAGCCCATTGAGCCGTATGTCTCCACCCGGGACAAGAACCGGA
CGCGGATCCTGGGCATGGTGCGCCAGCACATCGACACCGTGGAGGCGGGT
GGCAATACCGCCGGCCGCACCTTCCGCGACAGTCTGGACGCCCAGCTGCC
GCGACTCCATCGCGCCGTCTCCGAGTCCTTGCCAGTTCGCCGGGAGACCT
ACCGCAACGAGAGGTCGGGCGCGATGGTCACCAAAGTACTCCTACGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATGACAAACGGCATGATGAACCTTGAATCGCCAGCGGCATCAGCACCTTG
TCGCCTTGCGTATATATTTTGCCCATGGTGATACGGGGCGAGAGTTGTCC
TATTGGCCACGTTTAAATCAACTGGTGAAACTCCACCCAAGATTGCCTGA
GACGAACTATTCCCATTAACCTTTAGGAATAGCCAGGTTTCACGTAACCG
CCCAATCTGGCGAATATAT
UFO09493.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG45078-RA | 1925 | CG45078-RA | 169..612 | 1..445 | 2200 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10774652..10775066 | 445..30 | 2030 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:05:30 has no hits.
UFO09493.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:04 Download gff for
UFO09493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fau-RB | 163..606 | 1..445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:15 Download gff for
UFO09493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fau-RB | 169..602 | 1..434 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:41 Download gff for
UFO09493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG45078-RA | 169..602 | 1..434 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:41 Download gff for
UFO09493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10774662..10775065 | 31..434 | 100 | <- | Minus |
| 3R | 10777177..10777206 | 1..30 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:15 Download gff for
UFO09493.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6600384..6600787 | 31..434 | 100 | <- | Minus |
| arm_3R | 6602899..6602928 | 1..30 | 100 | | Minus |
