UFO09519.5prime Sequence
1086 bp (1002 high quality bases) assembled on 2011-08-18
> UFO09519.5prime
CAGTCGACATGATCACCGTGATGCCCAATAAAACTGCCATGACGAAAGTC
GAGCCGCCCAACAACGCTCTCAAAGTCACACTACATGGACCAGTACAGAG
TAATGGAGCTGACGGCGTGGACTTGCGCTTGGAATGGCGGAGCTCAGATT
TAAATGTGACTTACCGCCGGACCGAGGTGTGGAACATTGGCATAAGCAAT
GATGATACGGCATACGCGAAAGTGTCGAGAAACTTCATGGTCAAAAGAAC
GGGAGGGGCAGATAGTCAAGCAGTTATCTCGCTGGAGAGTAAACGGAATT
CTCCGATATCCCTGCACGTTGTTATAGACACAAATCCGATGGTCACTGAT
ATGTGCCTCGTTTGTGCAGGGCTCTTGATCCTTGGACTCTATATGCTGAT
CATTTTTGACGTAATCGATCACACCTTTGCTGCACTCATTATAGCTACCA
CAGCTGTCGCGATTCTCGCTATCCTGGAGCACCGGCCCAGCATGCGTGCG
ATAGTATCATTTGTTAACTTCGAGCCCCTAATGTTGCTCTTCGGGCTAAT
GACCATTGTGGATATTATGGCGACAACGGGTGTCTTCGATTTCCTGGTCG
TTTGGACCTACAGGATTTCCAGGGGTCGACCGTGGCCGCTTATTTTTTTT
CTGAGCATGCTGACCGCTTTTTTGTCCGCTTTCCTGAACAGCGATATCAT
GGCTTTGTCACTAACCCCAATAACTATCCGTCTGTGCGAGGAGATGTCCC
TGCGAACCAGCTACGTTCTGGTCGTAATGGCTATATTCGCAGATATGGGC
GGTGCATTAACGCCTTTGGGAAATCCACCCAATGCGATCGTAACGACAAG
TCCGGGTTGCGGTTGCGGAAAGGAGTTGACTTTGCCCACTTTATATACAC
ATGATGCCAGGAGTGCTGGCGCGATGTTCGTGGTCTTTGGTATAATTTAC
GTGACCCACAGAAAAAGTATATTTGTCCTGATCAAATCAGTGGGATCTTA
TGGAGGAGAGGAACCAGAAGGAAAAAACCGCCCAGCAGGAAACCCTAGGA
CGCCATAGTCTCCTCAGGTAGCCTTGCAAGCAGATA
UFO09519.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:14:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31693-RB | 2080 | CG31693-RB | 231..1290 | 9..1066 | 4965 | 98.4 | Plus |
| CG31693-RA | 2145 | CG31693-RA | 287..1346 | 9..1066 | 4965 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22015476..22016517 | 9..1048 | 4750 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:14:40 has no hits.
UFO09519.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:41 Download gff for
UFO09519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RB | 183..1249 | 1..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:28 Download gff for
UFO09519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RA | 280..1346 | 1..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:19 Download gff for
UFO09519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RA | 280..1346 | 1..1066 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:19 Download gff for
UFO09519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22015469..22016535 | 1..1066 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:28 Download gff for
UFO09519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22015469..22016535 | 1..1066 | 98 | | Plus |
