UFO09523.5prime Sequence
1117 bp (1016 high quality bases) assembled on 2011-08-18
> UFO09523.5prime
CAGTCGACATGAACGATGCAATGGAAGAAATGCTGCTTCGACCAGCCATT
ATCACCTGCCCGGAAGTGCGCACCAAACCTACTCCTCCAAACTTATCGCG
CAGCAAATCCAAAGCTTCTGTGGCAGTTAATTTGGGCGAACCTCCTGTTC
AAATCGGCCGGGATAATCTTGGCAGCTCGGAGAGCTGCAGCTCCATTCTT
CTTGACTACGTTAATGATCAAAGCAAGCAACTCAAGTCGGACCTGCAGGC
CGAGCAGTCAAACTCACTGAAATCGATGAGGCTAAAGAGTTTGCTTGAGC
GCATTGAGAAAATTCGAGTCCAGCTGTTGGAGGAACTGAAGGCGGGTGAG
TCAGGTGCATCAAAGGGTGACAATGCACAGGAATTGAATAATATACGTCA
GGAGCGAGCTGATATTCTATCCGAGCGAACGAGAACTTTAAACGAACGAG
AATCTGATTTGCAACAGAAGGAGGCTATTCTCGAGCAGCGTCTAAGAAAG
TTCTACAAGGAGACAAAAAACGCAAAATCCAGTGAGAGTGATAAGCCAAA
ATCAAACGCAAAAGAAGATGGGCCAGTTGAGATCATTATTAAGGTGAGGA
GTGACGGTACTGTTAAGCAATATGTACCGAGAACAAAATCGAAAGCCAAA
ACCAAGCCGTCGGCTATCGACAATGAAAAGGATGTGCCCCTGGGCTCAAC
TGACAGCACACCAAGAGACGATGAGCCAAAGCCGACGGAACAGGATCACG
GAAAGCGACCATTCTTACAGGATCAGCGTCAGATATCCATTGATTCCAAC
TCCACTGCCTATCGCAGTCTGCCGCCAGTGAGCTATAAAATATGACCACG
GCCGCTCCCCCTTCTGCTCCATTACATCCCATGGTGGTTCAATATATAAA
TCGTCTGCTAGGAATGACACGCCAAAATATCGATGAGATGGGTGTGAGTT
CCTCGTGTGTGACCACACCATCAACGTCGGTGATCACTCATTGAAAACGT
ATCCCTGTCCCGAGCTGATCGGAAGGCTGACGGATCAGATGAAACGGAAT
GAACGAGCATCGCATGGACGGGTGCCAACTTATGCGACATCCGCAGCTTA
TCATGACTGAAGATCAT
UFO09523.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:15:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ana1-RC | 5610 | CG6631-RC | 2131..3243 | 9..1100 | 4985 | 97.5 | Plus |
| ana1-RA | 5526 | CG6631-RA | 2047..3159 | 9..1100 | 4985 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:15:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24532916..24533894 | 9..986 | 4830 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:15:17 has no hits.
UFO09523.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:45:43 Download gff for
UFO09523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2029..3007 | 9..986 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:52 Download gff for
UFO09523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2047..3025 | 9..986 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:32 Download gff for
UFO09523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ana1-RA | 2047..3025 | 9..986 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:32 Download gff for
UFO09523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24532916..24533894 | 9..986 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:52 Download gff for
UFO09523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20358638..20359616 | 9..986 | 99 | == | Plus |
