UFO09607.5prime Sequence
1104 bp (1017 high quality bases) assembled on 2011-09-06
> UFO09607.5prime
ACACCATGGTGAGCAAGGGCGAGGAGGATAACATGGCCATCATCAAGGAG
TTCATGCGCTTCAAGGTGCACATGGAGGGCTCCGTGAACGGCCACGAGTT
CGAGATCGAGGGCGAGGGCGAGGGCCGCCCCTACGAGGGCACCCAGACCG
CCAAGCTGAAGGTGACCAAGGGTGGCCCCCTGCCCTTCGCCTGGGACATC
CTGTCCCCTCAGTTCATGTACGGCTCCAAGGCCTACGTGAAGCACCCCGC
CGACATCCCCGACTACTTGAAGCTGTCCTTCCCCGAGGGCTTCAAGTGGG
AGCGCGTGATGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGAC
TCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTGAAGCTGCGCGGCAC
CAACTTCCCCTCCGACGGCCCCGTAATGCAGAAGAAGACCATGGGCTGGG
AGGCCTCCTCCGAGCGGATGTACCCCGAGGACGGCGCCCTGAAGGGCGAG
ATCAAGCAGAGGCTGAAGCTGAAGGACGGCGGCCACTACGACGCTGAGGT
CAAGACCACCTACAAGGCCAAGAAGCCCGTGCAGCTGCCCGGCGCCTACA
ACGTCAACATCAAGTTGGACATCACCTCCCACAACGAGGACTACACCATC
GTGGAACAGTACGAACGCGCCGGGGGCCGCCACTCCACCGGAGGCATGGA
CGAGCTGTACAAGGGGAATTCGATAACTTCGTATAGCATACATTATACGA
AGTTATCAGTCGACATGCTCAAGGCTCTGTACGACTTCCAGGCGGTCTAT
CCGAAGACCATCAGCTTCGATGAGGGCGAGTACTTCATCCTTTACCAGAC
GTCCGCCCGCCAGCGCAATTGGTGGCATGTTGTCAGCATGAAAGGCAACA
TTGGCTTTGTGCCCTCCAATTCGGTAATGAAGATTAAGTGGAGCACGACT
TCCTCATCAGCTTTTCTGACTCCTCCGATAGAATCGCTGGAGAAGTGCAC
GGACCATGAAGATCATGGCATCATGTCCAAGAATGCGACATGCGCTCTAG
CTCCATCACGCTGACGCACGGCACCCCACGACATACATCGAGACTTGCGC
GCGG
UFO09607.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:27:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2258-RD | 5277 | CG2258-RD | 474..745 | 760..1031 | 1150 | 96 | Plus |
| CG2258-RA | 3570 | CG2258-RA | 1115..1386 | 760..1031 | 1150 | 96 | Plus |
| CG2258-RC | 3920 | CG2258-RC | 910..1181 | 760..1031 | 1150 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8099351..8099529 | 938..760 | 835 | 97.8 | Minus |
| X | 23542271 | X | 8099198..8099290 | 1031..938 | 270 | 88.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:27:02 has no hits.
UFO09607.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:49 Download gff for
UFO09607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2258-RA | 1054..1337 | 757..1043 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:14:42 Download gff for
UFO09607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2258-RC | 908..1191 | 757..1043 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:36 Download gff for
UFO09607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2258-RC | 908..1191 | 757..1043 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:39:36 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 13:14:42 has no hits.
