UFO09626.5prime Sequence
1091 bp (1007 high quality bases) assembled on 2011-09-06
> UFO09626.5prime
ACACCATGGTGAGCAAGGGCGAGGAGGATAACATGGCCATCATCAAGGAG
TTCATGCGCTTCAAGGTGCACATGGAGGGCTCCGTGAACGGCCACGAGTT
CGAGATCGAGGGCGAGGGCGAGGGCCGCCCCTACGAGGGCACCCAGACCG
CCAAGCTGAAGGTGACCAAGGGTGGCCCCCTGCCCTTCGCCTGGGACATC
CTGTCCCCTCAGTTCATGTACGGCTCCAAGGCCTACGTGAAGCACCCCGC
CGACATCCCCGACTACTTGAAGCTGTCCTTCCCCGAGGGCTTCAAGTGGG
AGCGCGTGATGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGAC
TCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTGAAGCTGCGCGGCAC
CAACTTCCCCTCCGACGGCCCCGTAATGCAGAAGAAGACCATGGGCTGGG
AGGCCTCCTCCGAGCGGATGTACCCCGAGGACGGCGCCCTGAAGGGCGAG
ATCAAGCAGAGGCTGAAGCTGAAGGACGGCGGCCACTACGACGCTGAGGT
CAAGACCACCTACAAGGCCAAGAAGCCCGTGCAGCTGCCCGGCGCCTACA
ACGTCAACATCAAGTTGGACATCACCTCCCACAACGAGGACTACACCATC
GTGGAACAGTACGAACGCGCCGAGGGCCGGCCACTCCACCGGCGGCATGG
ACGAGCTGTACAAGGGGAATTCGATAACTTCGTATAGCATACATTATACG
AAGTTATCAGTCGACATGCTCTTCAAGTGGCTCCTGTTCAGCCTGTGCAT
AATGCCGGCCATGTTCAGCAATACGAAGAGGAAATGCCCCACTGAATGCC
AATGCAGCATGGACGACTTTGATCGTTATCAGGCCATCTGCACAAAGGAG
GCCTGAATTCACTGCTGTCGCCCAATGAGTTGGACGTCGATGTTAAAGTT
ATTATCATCCGTGGACCCAGGAATTTCATTTACAATCCGGTCCCAGCCGC
TGCGGCAAGTACATGTAAACTGGAAATACTCGGCATCCACGACTTCCTAT
CTGGCGGGCAGAAGGGCGCGGATGCGTTTTGGGGGCCCTCA
UFO09626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:27:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rdo-RB | 3848 | CG15151-RB | 722..1032 | 766..1084 | 1155 | 92.8 | Plus |
| rdo-RA | 3800 | CG15151-RA | 722..1032 | 766..1084 | 1155 | 92.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:27:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18051461..18051591 | 766..896 | 640 | 99.2 | Plus |
| 2L | 23513712 | 2L | 18062360..18062444 | 896..980 | 410 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:27:38 has no hits.
UFO09626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:56 Download gff for
UFO09626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rdo-RA | 688..968 | 759..1044 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:20:00 Download gff for
UFO09626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rdo-RA | 715..995 | 759..1044 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:57 Download gff for
UFO09626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rdo-RA | 715..995 | 759..1044 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:57 Download gff for
UFO09626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18051461..18051593 | 766..897 | 98 | -> | Plus |
| 2L | 18062362..18062502 | 898..1044 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:20:00 Download gff for
UFO09626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18051461..18051593 | 766..897 | 98 | -> | Plus |
| arm_2L | 18062362..18062502 | 898..1044 | 91 | | Plus |
