UFO09636.5prime Sequence
1122 bp (1014 high quality bases) assembled on 2011-09-06
> UFO09636.5prime
CAGTCGACATGGCCTGGTTAACTAAAATAATCATTATATTTATCCTTTTG
CTACACACTCAATTGACTCAACTGATACAGTATATTGACGATGGTGACAC
ATTTGATGGCTTTAACTCCATATTTGAAAAGCCAAAGAAGCAACGAAGCG
GTGCCATGGAGGACGATTTCGATCGAGATCGGGATCAGTGGAAGGTCAAT
ACCGACATGGACTCGCAATCGGGCATATGTCCCGCCGAAAATCCGAATGA
TGTGAAGTATGAAAAGAAGGATCGCTGCAAGGTTGACAGGAAGATGGTCA
AGGACGAGGACGATGACGAGAATGCCGATCCTGCGGGCAATAGTGATGAC
GATGATATCCATGATGGTGATGAAGACAATGGCGATGATGAGGCTTATGA
AGAGGAGGACGACGACATTAGTTTTGAGGATGAAGCTTTTGTTTCGAGAA
TTAACTGTTTGTTGGGATCTCTGCACAAGCACACCAAAGCCATAACCGAT
AATCTGCAGATCCTTCAATCCCGCTTGTCAAAAGCGAAAAATGACAACAT
ATGCAGAAACAACAACCAAGGCACTACGCCTACGGAACATCCTAGTCTGA
AATGGTCCAAGAAGCCGGATTTCTATGAGGCAACCGAGCTGTGTGCTGAT
GACAACTGCCATTTCGAGGACAGTGTGGATAACAAAGAGGTCCAGCCACA
AGCTTTTACTGAGGATCGTCGAGTGATGGTTCCGCCTCTATTGCAACTCT
TCCATGGTCCTGTCCAGCTGCAAACCACTTTGAACAGCGGCCAGGACATC
ACGGGATCAAAGTCGAGATATTGGATGACCTCACCGGAAACATCAGAGGA
GTTTCAGGCTTCATCGCAATTACAGCCGGATGAAAAAATCAAGAACGATA
CGAGGATTACGATGCTATATTGCGTCGCCTCATGGACAGTCGGGATGAGA
TCGAGCGAAATGGTGAGGAGAATGATAACTCCGGATTTAGCAAGCTTTCT
AGACCATTCGTTTGGCGGCGGCGGGCCCAGGTAAGGTGGTCATAATCATA
ATTCATAACTCATAATTCATATCCACAACTAGCCCTAGGGAAGATTCCTT
GGTCTATGACTATGCCTTGATT
UFO09636.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:27:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43996-RA | 1067 | CG43996-RA | 21..1001 | 9..989 | 4830 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:27:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17022324..17023304 | 9..989 | 4780 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:27:32 has no hits.
UFO09636.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:55 Download gff for
UFO09636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12433-RB | 21..1004 | 9..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:19:02 Download gff for
UFO09636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43996-RA | 21..1004 | 9..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:53 Download gff for
UFO09636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43996-RA | 21..1004 | 9..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:53 Download gff for
UFO09636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17022324..17023304 | 9..989 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:19:02 Download gff for
UFO09636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16916357..16917337 | 9..989 | 99 | == | Plus |
