UFO09654.5prime Sequence
1121 bp (1027 high quality bases) assembled on 2011-09-06
> UFO09654.5prime
ACACCATGGTGAGCAAGGGCGAGGAGGATAACATGGCCATCATCAAGGAG
TTCATGCGCTTCAAGGTGCACATGGAGGGCTCCGTGAACGGCCACGAGTT
CGAGATCGAGGGCGAGGGCGAGGGCCGCCCCTACGAGGGCACCCAGACCG
CCAAGCTGAAGGTGACCAAGGGTGGCCCCCTGCCCTTCGCCTGGGACATC
CTGTCCCCTCAGTTCATGTACGGCTCCAAGGCCTACGTGAAGCACCCCGC
CGACATCCCCGACTACTTGAAGCTGTCCTTCCCCGAGGGCTTCAAGTGGG
AGCGCGTGATGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGAC
TCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTGAAGCTGCGCGGCAC
CAACTTCCCCTCCGACGGCCCCGTAATGCAGAAGAAGACCATGGGCTGGG
AGGCCTCCTCCGAGCGGATGTACCCCGAGGACGGCGCCCTGAAGGGCGAG
ATCAAGCAGAGGCTGAAGCTGAAGGACGGCGGCCACTACGACGCTGAGGT
CAAGACCACCTACAAGGCCAAGAAGCCCGTGCAGCTGCCCGGCGCCTACA
ACGTCAACATCAAGTTGGACATCACCTCCCACAACGAGGACTACACCATC
GTGGAACAGTACGAACGCGCCGAGGGCCGCCACTCCACCGGCGGCATGGA
CGAGCTGTACAAGGGGAATTCGATAACTTCGTATAGCATACATTATACGA
AGTTATCAGTCGACATGACGACCCCGCTGCAGACACGAATGGCACTGGCC
GAGATTCCCGACCGCCTGGAGGCGCTGCGTATGGCCAACACACCGACGAA
CTCCAATCGCCGGACTCCGGATGAGCCGACTCCAGCGGCCATCATAAACA
CTCCGAATGCTAACGGAGGACTGGGACTGCGGGTGGACACGATGTAAACG
TGGTGCAGCCCAGACTTTGTCATCTCTCATTGCCTCGCCAGATGAGCTGG
TCATCGGCAGCGTGTCGCGTCGCTTTACCACACATATTCTCAGATTAGTC
AACGAGTGTGCGCAGAGAGGTGCAGCGTGGTCCTCATGCGTAGTCCTCCA
GGCACGCCACAGACTTCACTT
UFO09654.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5199-RB | 1639 | CG5199-RB | 213..580 | 765..1108 | 1220 | 92.9 | Plus |
| CG5199-RA | 1643 | CG5199-RA | 217..584 | 765..1108 | 1220 | 92.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20452320..20452575 | 1014..765 | 970 | 96.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:28:12 has no hits.
UFO09654.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:04 Download gff for
UFO09654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5199-RA | 207..583 | 755..1111 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:25:23 Download gff for
UFO09654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5199-RA | 210..586 | 755..1111 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:16 Download gff for
UFO09654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5199-RA | 210..586 | 755..1111 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:40:16 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 13:25:23 has no hits.
