UFO09658.5prime Sequence
1144 bp (1041 high quality bases) assembled on 2011-09-06
> UFO09658.5prime
ACACCATGGTGAGCAAGGGCGAGGAGGATAACATGGCCATCATCAAGGAG
TTCATGCGCTTCAAGGTGCACATGGAGGGCTCCGTGAACGGCCACGAGTT
CGAGATCGAGGGCGAGGGCGAGGGCCGCCCCTACGAGGGCACCCAGACCG
CCAAGCTGAAGGTGACCAAGGGTGGCCCCCTGCCCTTCGCCTGGGACATC
CTGTCCCCTCAGTTCATGTACGGCTCCAAGGCCTACGTGAAGCACCCCGC
CGACATCCCCGACTACTTGAAGCTGTCCTTCCCCGAGGGCTTCAAGTGGG
AGCGCGTGATGAACTTCGAGGACGGCGGCGTGGTGACCGTGACCCAGGAC
TCCTCCCTGCAGGACGGCGAGTTCATCTACAAGGTGAAGCTGCGCGGCAC
CAACTTCCCCTCCGACGGCCCCGTAATGCAGAAGAAGACCATGGGCTGGG
AGGCCTCCTCCGAGCGGATGTACCCCGAGGACGGCGCCCTGAAGGGCGAG
ATCAAGCAGAGGCTGAAGCTGAAGGACGGCGGCCACTACGACGCTGAGGT
CAAGACCACCTACAAGGCCAAGAAGCCCGTGCAGCTGCCCGGCGCCTACA
ACGTCAACATCAAGTTGGACATCACCTCCCACAACGAGGACTACACCATC
GTGGAACAGTACGAACGCGCCGAGGGCCGCCACTCCACCGGCGGCATGGA
CGAGCTGTACAAGGGGAATTCGATAACTTCGTATAGCATACATTATACGA
AGTTATCAGTCGACATGTCGCAACAGCGCTCCACAGAGCAGATTGCAGCT
AGCAACAACAACACCAGCGATGTAATAGCGCTGGACGACGACGAGGATAC
GGATGTGCAATTCGTTGCAGCTCTGCGTCCCACCGCACCAGTCATCGATC
TTTGCGTCTCGCCCTCCACTTCTGCTGCTGCTGCTGCGGCGGCGGCAGCT
GCAGCCCACTCAGGAGCGGAGTGGCGTGATCCGGCGGTTGATCCGCATCT
GGAGCTGCTGCTTCGGATACGATTCACTTGCTCTTCGCTGACGACACGTA
GCCACGGTGTGGATGCAACGGCAGCGTTTCTGCAAGATCCCCTCTGCACG
GCCGCTGCTTGAATGTCCATCTGTTGCACCTGAATCACCCAGCT
UFO09658.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8786-RG | 3862 | CG8786-RG | 149..554 | 764..1144 | 1360 | 92.6 | Plus |
| CG8786-RF | 1376 | CG8786-RF | 149..554 | 764..1144 | 1360 | 92.6 | Plus |
| CG8786-RC | 1667 | CG8786-RC | 149..554 | 764..1144 | 1360 | 92.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19642395..19642668 | 1032..764 | 1110 | 97.1 | Minus |
Blast to na_te.dros performed 2014-11-26 23:28:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2767..2864 | 1012..916 | 117 | 61.6 | Minus |
UFO09658.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:02 Download gff for
UFO09658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8786-RB | 138..498 | 757..1098 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:23:56 Download gff for
UFO09658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8786-RC | 140..500 | 757..1098 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:12 Download gff for
UFO09658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8786-RC | 140..500 | 757..1098 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:40:12 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 13:23:56 has no hits.
