Clone UFO09676 Report

Search the DGRC for UFO09676

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:96
Well:76
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32214-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09676.5prime Sequence

1104 bp (1023 high quality bases) assembled on 2011-09-06

> UFO09676.5prime
CAGTCGACATGTTCAAATACGCTGTCGTCGTTCTCGCTCTCGTTGCCTGC
GCTGCTGCCAAGCCTGGACTCCTGGGTGCTCCCCTTGCTTACACTGCTCC
TCTGGCTTACTCTGCTCCTGCTGCCGTGGTAGCTGCTCCCGCTCCAGTTG
TGACCGCAACCAGTAGCCAGGTCATCGCCAGGAATTACAATGGAATCGCC
GCTGCTCCTGTGATTGCTCCCGTTGCTGCTCCTCTGGCTGCTCCTGTGGT
GGCGAAGTACGCGGCTACTCCTCTGGCTGCACCACTGGCCTACTCCTCTC
CTTTGGCTTACTCCGCACCACTGAGCTACGCCGCTGCTTCAGGACCGCTC
CTTATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCACAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCA
GCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCG
AAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCAC
CCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGA
AATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGT
AGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTT
TCAGGTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATAT
CACCAGCTCACCGTCTTTCATGCCATACGAAATCGGATGACATCATCAGG
CGGGCAGAATGTCAATAAAGCGATAACTTGGTCTTATTTCTTACGGTCTT
AAAG

UFO09676.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:29:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32214-RC 756 CG32214-RC 54..402 8..356 1745 100 Plus
CG32214-RB 465 CG32214-RB 54..402 8..356 1745 100 Plus
825-Oak-RB 514 CG32208-RB 51..323 8..280 1365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:28:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19467471..19467806 21..356 1680 100 Plus
3L 28110227 3L 19471847..19472106 280..21 1300 100 Minus
3L 28110227 3L 19475961..19476220 21..280 1270 99.2 Plus
3L 28110227 3L 19472620..19472844 31..237 700 88.4 Plus
3L 28110227 3L 19475223..19475447 237..31 700 88.4 Minus
3L 28110227 3L 19466728..19466952 237..31 685 88 Minus
3L 28110227 3L 19472858..19472990 224..356 530 93.2 Plus
3L 28110227 3L 19471750..19471863 338..225 510 96.5 Minus
3L 28110227 3L 19476204..19476317 225..338 510 96.5 Plus
3L 28110227 3L 19423906..19424044 80..218 485 89.9 Plus
3L 28110227 3L 19478430..19478568 80..218 485 89.9 Plus
3L 28110227 3L 19423002..19423298 333..46 415 78.3 Minus
3L 28110227 3L 19486803..19486968 355..189 410 84.4 Minus
3L 28110227 3L 19488102..19488245 80..232 295 81 Plus
3L 28110227 3L 19488045..19488123 41..119 275 89.9 Plus
3L 28110227 3L 19424757..19424836 133..212 265 88.8 Plus
3L 28110227 3L 19477672..19477760 356..268 265 86.5 Minus
3L 28110227 3L 19464433..19464518 217..132 205 82.6 Minus
3L 28110227 3L 19478373..19478428 41..96 205 91.1 Plus
3L 28110227 3L 19423849..19423904 41..96 190 89.3 Plus
Blast to na_te.dros performed 2014-11-26 23:29:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2999 250..22 152 57.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2777..2891 151..34 151 60.2 Minus

UFO09676.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:15 Download gff for UFO09676.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 48..405 1..364 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:32:51 Download gff for UFO09676.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 51..408 1..364 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:43 Download gff for UFO09676.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 51..408 1..364 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:40:43 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 13:32:51 has no hits.