Clone UFO09677 Report

Search the DGRC for UFO09677

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:96
Well:77
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32655-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09677.5prime Sequence

520 bp (520 high quality bases) assembled on 2011-09-06

> UFO09677.5prime
CAGTCGACATGGCCGAGAAGAAATCCCAGGACAATAAGGATAATGTCAGT
GGATCCCAGAATCGAACGAGCCGCGTGGAAGCCCATGTTCGCCAGCAAGA
AGAGAATAATGCTATATTTGCTCGACTTTTTGCCAGTTTGGACGCTGAAC
ATCGTAAATTGAAAGAACTTGAAGAGCGCAGATCGCAGCTAATTGAAGAA
ATGAAAAATTTGAGGTCTCTACTCTTTGTTGAGAATAAAAAACTTCGACA
GACCGTTGCTCCCATTTCGGGTGGAAATCCATTACCAATTCCAGCTACCA
GTGCTAGTTCCGTCGTGAAAAAGAGTTCGGAGAAACCTTCTGGCTCTAGG
ACCTCTCCCATTATCAAGTCAGCACGTTTGGAACGACGACCTTCCAATAA
ATCGGTTACAATTGCCGATCCACCAACACAAAGTTTAACGACTAGCGAAA
GACCCAAGGCAAGTAGTTCACAAGGTTTAAAGAAAAAGGAAAATCGACGA
AGTCTCGTTGTTCCAGCAAG

UFO09677.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG32655-RA 1250 CG32655-RA 149..660 9..520 2560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12235218..12235729 520..9 2560 100 Minus
Blast to na_te.dros performed on 2014-11-26 23:29:04 has no hits.

UFO09677.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:16 Download gff for UFO09677.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32655-RA 1..512 9..520 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:33:20 Download gff for UFO09677.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32655-RA 149..660 9..520 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:45 Download gff for UFO09677.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32655-RA 149..660 9..520 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:45 Download gff for UFO09677.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12235218..12235729 9..520 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:33:20 Download gff for UFO09677.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12129251..12129762 9..520 100   Minus