UFO09679.5prime Sequence
1094 bp (982 high quality bases) assembled on 2011-09-06
> UFO09679.5prime
CAGTCGACATGAGCAAAGTAACCTTCAAAATCACGCTAACTTCGGACCCC
AAGCTGCCCTTTAAGGTGCTTAGTGTTCCGGAGGGAACTCCCTTTACGGC
TGTGCTGAAATTCGCCTCTGAAGAGTTCAAGGTTCCGGCGGAGACGAGTG
CCATCATCACGGACGATGGAATTGGCATCAGCCCACAGCAGACTGCTGGT
AATGTGTTCCTAAAGCACGGATCCGAGCTGCGCCTCATACCCAGAGATCG
AGTGGGCCACCAACTAAGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTG
CGAATATATGTGTAGAAACTGCCGGAATCGTCGTGGTATTCACTCCAGAG
CGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGAAC
ACTATCCCATATCACCAGCTCACGTCTTTCATTGCCATACGAAATTCCAG
ATGACCATTCATCAGCGGGCAAGATGTGATTAACGCCGATAAACTTGTGC
TTATTTTTTCTTTACGGTCTTTAAAGCGTATATCAGCTGACGTCTGTTTT
AGTACCTGACACTGACTGAATGCCTCAATGTCCTTACGATGCAT
UFO09679.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34191-RA | 647 | CG34191-RA | 304..564 | 9..269 | 1305 | 100 | Plus |
| CG34191-RB | 479 | CG34191-RB | 136..396 | 9..269 | 1305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16952238..16952498 | 9..269 | 1305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:29:34 has no hits.
UFO09679.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:43 Download gff for
UFO09679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34191-RA | 127..404 | 1..279 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:34:14 Download gff for
UFO09679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34191-RB | 127..404 | 1..279 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:02:16 Download gff for
UFO09679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34191-RB | 127..404 | 1..279 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:02:16 Download gff for
UFO09679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16952229..16952498 | 1..269 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:34:14 Download gff for
UFO09679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12839734..12840003 | 1..269 | 98 | == | Plus |
