UFO09685.5prime Sequence
1090 bp (992 high quality bases) assembled on 2011-09-06
> UFO09685.5prime
CAGTCGACATGCCAGATGCCGAGCAACTACCGGACGGCTGGGAGAAGCGC
ACTAGCCGCTCCACAGGAATGAGCTATTATCTCAATATGTACACAAAGGA
GTCGCAGTGGGATCAGCCCACAGAGCCGGCGAAGAAGGCGGGCGGAGGAT
CCGCCGGCGGCGGAGATGCACCGGACGAGGTGCATTGCCTGCATCTGCTG
GTTAAGCACAAGGGCAGTCGGCGTCCCAGCTCGTGGCGCGAGGCGAACAT
CACGCGCACCAAGGAGGAGGCCCAGCTGCTCCTCGAGGTCTATCGCAACA
AAATCGTCCAGCAGGAGGCCACATTCGACGAGCTGGCCCGCTCCTACTCC
GACTGCAGCTCCGCCAAGAGGGGCGGCGACCTGGGAAAGTTCGGCAGAGG
TCAGATGCAGGCGGCTTTCGAGGACGCTGCCTTCAAATTGAACGTCAACC
AGCTGTCGGGCATCGTCGACAGCGACTCCGGCCTGCACATCATCCTGCGC
AAGGCAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCA
GCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAAACGGGGCGAA
GAGTGTCCATATGCCACGTTTAATCAAACTGGTGAACTCACCAGGATGCT
GAGACGAAAAACATATCTCATAACCCTTTAGGAATAGCAGTTTCACGTAA
CACGCCCATCTGCAATATATGTGTAGAACCTGCGATCGTCTGCTATCCAC
TCGAGCGATGAACGTCCAGTTGCCATGACGGTACAGGGTA
UFO09685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dod-RA | 1021 | CG17051-RA | 93..591 | 8..506 | 2495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21345617..21345954 | 64..401 | 1690 | 100 | Plus |
| X | 23542271 | X | 21346320..21346428 | 398..506 | 545 | 100 | Plus |
| X | 23542271 | X | 21345450..21345509 | 8..67 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:29:47 has no hits.
UFO09685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:46 Download gff for
UFO09685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 100..601 | 1..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:34:22 Download gff for
UFO09685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 90..591 | 1..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:02:25 Download gff for
UFO09685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dod-RA | 90..591 | 1..506 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:02:25 Download gff for
UFO09685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21345620..21345952 | 67..399 | 100 | -> | Plus |
| X | 21346322..21346428 | 400..506 | 100 | == | Plus |
| X | 21345447..21345508 | 1..66 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:34:22 Download gff for
UFO09685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21216474..21216535 | 1..66 | 93 | -> | Plus |
| arm_X | 21216647..21216979 | 67..399 | 100 | -> | Plus |
| arm_X | 21217349..21217455 | 400..506 | 100 | == | Plus |
