UFO09704.5prime Sequence
1096 bp (994 high quality bases) assembled on 2011-09-19
> UFO09704.5prime
CAGTCGACATGTGGTCGAAAATTGCCATCGCCGGAGCCCTGCTCGTGATG
GGTGGCGTCCTGTCCTCCAGCGTGGTGGACAACTTCGCCTACGTGGATCG
CTCGCTGCCGGTGGCCATGCCCAAGGCAAAGGCCTTCCAAGTGAAACAGG
AGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGG
AAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCAC
CTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGA
AGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAG
GGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATA
GGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAA
ACTGCCGGAAATCGTCGTGGGTATTCACTCCAGAGCGATGAAAACGTTTC
AGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCA
CCAGCTCACCGTCTTTCATTGCCATACGAAATTCCGGGATGAGCATTCAT
CAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAACTTGTGCTTATTTT
TTCTTTACGGTCTTTAAAAGGCGGTAATTATCCAGCTGACCGGTCTGGTT
ATAGGTACAATTGAGCAACTGACTGAAATGCCTCAAATGTTCTTTACGGT
TGCCATTGGGAACGATCAACGGTTGGTTTTTTCAGGTGATTCTTTCCTCC
ATTTTAGCTTCCCTAAGCCTCCTGAGAGTCCATACCTCGTTAGGCC
UFO09704.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:30:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34330-RB | 699 | CG34330-RB | 206..350 | 8..152 | 725 | 100 | Plus |
| CG34330-RA | 618 | CG34330-RA | 125..269 | 8..152 | 725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:30:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19068624..19068768 | 152..8 | 725 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:30:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 220..299 | 710..789 | 129 | 65.4 | Plus |
UFO09704.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:33 Download gff for
UFO09704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34330-RA | 119..269 | 1..152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:44:49 Download gff for
UFO09704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34330-RA | 119..269 | 1..152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:24 Download gff for
UFO09704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34330-RA | 119..269 | 1..152 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:41:24 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 13:44:49 has no hits.
