Clone UFO09711 Report

Search the DGRC for UFO09711

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:97
Well:11
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32091-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09711.5prime Sequence

358 bp (261 high quality bases) assembled on 2011-09-19

> UFO09711.5prime
CAGTCGACATGGAACAGTCGCAGAACTTACTCGCCAAACAGTCCAAAAAT
GTGGAGTTCCAAGATGTGTACTACACCGTCAAGGAGCGCAAGAATTTCTG
GCGCGTAACCGGTGAGCGTCGAATTCTGAATGGAGTCAGCGGCAGTTTCC
GGAATGGTCAACTTTCGGCAATCATGGGACCCTCAGGAGCCGGAAAAAGC
AGTTTGCTTAATGCGATTTCGGGTTTCAGACGCGACGGAGTCACTGGGAA
CATCAAGATGAAGCGGGACAATGCCTGCTTTACACTCAGGACGACCACCA
CCAGACCTGCTAACTGTCAAGAGCTAAGATTCCGCCTGGCATCTCAATTA
AAGAATCG

UFO09711.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32091-RB 2967 CG32091-RB 680..1042 2..358 1545 96.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11640068..11640197 100..229 650 100 Plus
3L 28110227 3L 11635094..11635192 2..100 480 99 Plus
3L 28110227 3L 11640651..11640735 224..307 360 97.6 Plus
Blast to na_te.dros performed on 2014-11-26 23:30:08 has no hits.

UFO09711.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:30 Download gff for UFO09711.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32091-RB 676..1003 1..325 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:42:48 Download gff for UFO09711.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32091-RB 679..1006 1..325 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:17 Download gff for UFO09711.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32091-RB 679..1006 1..325 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:17 Download gff for UFO09711.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11635093..11635191 1..99 97 -> Plus
3L 11640068..11640197 100..229 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:42:48 Download gff for UFO09711.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11628193..11628291 1..99 97 -> Plus
arm_3L 11633168..11633297 100..229 100 -> Plus