UFO09712.5prime Sequence
648 bp (542 high quality bases) assembled on 2011-09-19
> UFO09712.5prime
CAGTCGACATGCGATTACGCCGCCGTTGGCCGCGAAGGATGCGGCGTGCC
ATGGAACAACTGCGTCTCCAGTCCCGCCGGAAGCTGCTGGCGCTCACGAT
GACTGGAGGACTCTGCCTGGCTATCTGGGTAGTTGCCAACTATCTGTCCG
CATCGGAGGAGGGCCAAACCGGCGGCTTCAGCAGCGCCTGCACTGCCATC
GATGCGGTTTACACGTGGGTCAATGGCTCGGATCCCAACTTTATTGAGGA
CATCCGGCGATTCGATGACAAGTACGATCCCTCGCGGTTCGATGACAAGA
ATGAGCTGCGGTACTCTCTGAGGTCCCTGGAAAAACACGCCGCATGGATC
ACGCATGTGTACATAGTAACCAATGGCCAGATTCCAAGTTGGCTGGATCT
CAGCTACGAAAGGGTCACGGTGGTGCCCCACGAAGTCCTGGCTCCCGATC
CCGACAGCTGCCCACCTTCTCCAGCTCGGGCATCGAGACATTTCTGCACG
CATACCAAAGCTGTCCAAGAAGGTTCCTCTACCTCAACGACGAATTTTCC
TGGGAGCTCCGCTGTATCGAGACTTGTCCCTGAACGGAGGGAGTTCGCGT
GTACAGGCATGATGGTGCCGCTGCCCCTTTGAATTGCCCCTGGACGTA
UFO09712.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:30:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8027-RA | 2597 | CG8027-RA | 101..750 | 9..648 | 2840 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:30:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9206402..9206872 | 568..100 | 2115 | 98.5 | Minus |
2R | 25286936 | 2R | 9206934..9207024 | 99..9 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:30:11 has no hits.
UFO09712.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:31 Download gff for
UFO09712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8027-RA | 92..746 | 1..647 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:43:19 Download gff for
UFO09712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8027-RA | 95..749 | 1..647 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:19 Download gff for
UFO09712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8027-RA | 95..749 | 1..647 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:19 Download gff for
UFO09712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9206315..9206872 | 100..647 | 96 | <- | Minus |
2R | 9206934..9207030 | 1..99 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:43:19 Download gff for
UFO09712.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5093820..5094377 | 100..647 | 96 | <- | Minus |
arm_2R | 5094439..5094535 | 1..99 | 95 | | Minus |