Clone UFO09712 Report

Search the DGRC for UFO09712

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:97
Well:12
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG8027-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09712.5prime Sequence

648 bp (542 high quality bases) assembled on 2011-09-19

> UFO09712.5prime
CAGTCGACATGCGATTACGCCGCCGTTGGCCGCGAAGGATGCGGCGTGCC
ATGGAACAACTGCGTCTCCAGTCCCGCCGGAAGCTGCTGGCGCTCACGAT
GACTGGAGGACTCTGCCTGGCTATCTGGGTAGTTGCCAACTATCTGTCCG
CATCGGAGGAGGGCCAAACCGGCGGCTTCAGCAGCGCCTGCACTGCCATC
GATGCGGTTTACACGTGGGTCAATGGCTCGGATCCCAACTTTATTGAGGA
CATCCGGCGATTCGATGACAAGTACGATCCCTCGCGGTTCGATGACAAGA
ATGAGCTGCGGTACTCTCTGAGGTCCCTGGAAAAACACGCCGCATGGATC
ACGCATGTGTACATAGTAACCAATGGCCAGATTCCAAGTTGGCTGGATCT
CAGCTACGAAAGGGTCACGGTGGTGCCCCACGAAGTCCTGGCTCCCGATC
CCGACAGCTGCCCACCTTCTCCAGCTCGGGCATCGAGACATTTCTGCACG
CATACCAAAGCTGTCCAAGAAGGTTCCTCTACCTCAACGACGAATTTTCC
TGGGAGCTCCGCTGTATCGAGACTTGTCCCTGAACGGAGGGAGTTCGCGT
GTACAGGCATGATGGTGCCGCTGCCCCTTTGAATTGCCCCTGGACGTA

UFO09712.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG8027-RA 2597 CG8027-RA 101..750 9..648 2840 96.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9206402..9206872 568..100 2115 98.5 Minus
2R 25286936 2R 9206934..9207024 99..9 455 100 Minus
Blast to na_te.dros performed on 2014-11-26 23:30:11 has no hits.

UFO09712.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:31 Download gff for UFO09712.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8027-RA 92..746 1..647 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:43:19 Download gff for UFO09712.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8027-RA 95..749 1..647 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:19 Download gff for UFO09712.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8027-RA 95..749 1..647 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:19 Download gff for UFO09712.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9206315..9206872 100..647 96 <- Minus
2R 9206934..9207030 1..99 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:43:19 Download gff for UFO09712.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5093820..5094377 100..647 96 <- Minus
arm_2R 5094439..5094535 1..99 95   Minus