UFO09719.5prime Sequence
1131 bp (974 high quality bases) assembled on 2011-09-19
> UFO09719.5prime
CAGTCGACATGACACAAAACCGGAGCACATGGATTGGATGCAGCTTGGGC
GGCCTGTTGGTCGCTCTATTGGCCCTGCAAACGATGCCACAGGGCACTGA
AGGAGCCAACATCCTGGGCGTCTTCACCAGCCACAGTCCGTCGCATTTCA
TTGTGCACATGTCCATCATGAAGACGCTGGCGGAGAAGGGTCACAATGTG
ACCGTCGTCTCCTCCGTTCCACCTAAAGTCACCCACAAGAGCATTAACCA
CATTGTGGTGCCAATGAGTGCCGAAGATGAGAAAGTGCTCAACGATGGTA
TGGCTGGAATGGTGAAGGAGAAGCCTTCGATTTGGAATACGATGAAATCG
ATCTTCAGCTCGTTAGCCCTGCTCATTGATAAGCAGGTGGACGTTTTGGA
GGATCCGCGCTTCCAGGAACTCTATCTGAACAAGGGCAACAAATTCGACG
TGGTCTTCGTGGGATTCTTCTTCAACACGTACCAGGTGGCGTTGGGTGCC
CGGTTTAATTGCCCCGTTATAATATCCTGGTCGGGCCCACCCATGATGAT
GGTCAACGAGGTGCTGGGTAATCCCGAGCTATCCAGTGTTCCCCAAATGC
ACATTTCCGCGCCTCCCGGTCAGCCTATGAATTTCCAGCAGCGAATGCAG
AACTTTGCCAGCACTTTGGGATTCAATGCTCTCAACATCTTCCTGAATCA
CAAATACAACAAGTTCTATGACCGTCTTTGGAGCAAAGACAAGTCAATGC
CCACTTTTGCGCAGGCCAAGAGGAATGTCTCTTTGGCGTTTTGCAATGGC
CATGGCATCAGCGAACGTCCCATTCGTCCGAATGTGCCTGGAGTAATCGA
AAATTGGAGGCATCCAGGTGAAGAGTTAGCCCGATCCACTGCCAGAGGAA
AATAAAAGGAGTTTCTGGAAGAAGGCAAGCACGGAGCCATTCTCTTCAGT
TTGGGTTTCAAACTTAAAAGGCGAACAATTCCAGCCCGAAGTGTAAAGAA
CATAATTCAATGGAATTGAGCAGCTTAAGCAGCAAGTGATCTGGAAGTGG
GGAAGGAATCCCAAAGAAAAACGCCCGCCAAGTCGCTTAAATTACTTCTA
AAAGAAGTGGGCTGCCCCAAGGAGCAGATTT
UFO09719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:31:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt36Bc-RC | 1738 | CG17932-RC | 40..1140 | 8..1119 | 4860 | 96.7 | Plus |
| Ugt36Bc-RB | 1954 | CG17932-RB | 256..1356 | 8..1119 | 4860 | 96.7 | Plus |
| Ugt36Bc-RA | 1934 | CG17932-RA | 236..1336 | 8..1119 | 4860 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:31:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16799807..16800520 | 8..721 | 3570 | 100 | Plus |
| 2L | 23513712 | 2L | 16800600..16800925 | 722..1051 | 1045 | 91.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:31:09 has no hits.
UFO09719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:43 Download gff for
UFO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RB | 244..1304 | 1..1068 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:51:18 Download gff for
UFO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RA | 228..1288 | 1..1068 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:45 Download gff for
UFO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RA | 228..1288 | 1..1068 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:45 Download gff for
UFO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16799799..16800520 | 1..721 | 99 | -> | Plus |
| 2L | 16800600..16800938 | 722..1068 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:51:18 Download gff for
UFO09719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16799799..16800520 | 1..721 | 99 | -> | Plus |
| arm_2L | 16800600..16800938 | 722..1068 | 92 | | Plus |
