UFO09724.5prime Sequence
1096 bp (978 high quality bases) assembled on 2011-09-19
> UFO09724.5prime
CAGTCGACATGCCTCGATTTTTCCAGTTGACGTGGGCTCTTCTTTTGATT
TTAATAGGTTTCACCACTGCTGTTACTTTTATCGGAGATGATCCTGTGGT
GGAGCTCTCCTTGGGCAGAATCCAAGGAGATACTATGCAGAGCTTTGGGA
ACAAGACAATCTACGCATTCAGAGGAATACGATACGCGCAATCTCCAGTG
GGACAGCTCCGGTTCGCCAATCCAGTTCCGGAAACTAGTTGGGGTGACGA
GGTGTTCAACGCAACATCGGATTCCCTCGTTTGTCCACAACCAGGAGTAG
TTTCTTTAATGAGTGAAGATTGCCTAAAGATCAACGTTTTCACGAAGAGC
TTCGAGGACAAATTCCCAGTGATGGTGTATATTCATGGCGGAGCCAATGT
CCTGGGAAGTGGACACAGCAGCTATGAAGCAGGACCTCAATATTTGCTAG
ATCAGGACGTAGTTTTTGTGGCTTTTAACTATCGCCTTGGAGCTCTGGGC
TTTCTAAGCACAAATAGCAGTGAGACAAAGGGAAACTTTGGTTTCCTCGA
TCAGGTGATGGCTCTGGAATGGGTAAGGGATCACATATCACACTTTGGTG
GTGATCCAGAGTTGGTGACTATTATCGGAATAAGTGCTGGCTCGATGGCA
GTCAGTCTACACTTGGCCTCGCCCCTTTCCGCAGGTCTCTTCCATCGGGC
AATCCTCATGAGTGGATCGGCCACCAATCACTTTGATATAGATAACCTTT
TTTGGACACGAAAACTGGCTCGTGAGCTGGGTTGTCCAATGTATGATCCC
ACGGATGTGGTGGAGTGTCTCCGAACGAAACGTGGACACGCATTGTGGAA
GTTTGCAAGGCATGGAACGTATCAGCTTGTTATATGAAGTGAACTACGAG
ATCGATGGACACTTTCTACACAACCATCCTACGAGCTATCAGAGGAAATT
TCAACAAGTTCCCTGCTATCAGTTTCACGCATGATTCGATACATGCAAAT
GTGCACTGAACAGCATCTATACCGAATTGGCTCACTTGTGGATTAGCCCG
ATGTTCTCTATCGCACGAATGCAAATAGAGAACTGAGACTTATCTA
UFO09724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:30:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3841-RB | 2051 | CG3841-RB | 121..1138 | 9..1007 | 4645 | 98.1 | Plus |
| CG3841-RA | 1967 | CG3841-RA | 37..1054 | 9..1007 | 4645 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:30:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9589666..9590595 | 9..933 | 4435 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:30:46 has no hits.
UFO09724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:39 Download gff for
UFO09724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3841-RB | 113..1148 | 1..1015 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:48:49 Download gff for
UFO09724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3841-RA | 29..1064 | 1..1015 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:36 Download gff for
UFO09724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3841-RA | 29..1064 | 1..1015 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:36 Download gff for
UFO09724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9589658..9590664 | 1..990 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:48:49 Download gff for
UFO09724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9589658..9590664 | 1..990 | 98 | | Plus |
