UFO09725.5prime Sequence
1106 bp (962 high quality bases) assembled on 2011-09-19
> UFO09725.5prime
CAGTCGACATGAACAGCAAGCTGCAGACCATCTCCCGATACATGCTCAGG
CAGAAATGTGCCTTCAACTCGATGCGCAGCATTTCCACCTCGATGCCCAG
CTTGATCAGCCATAAGCATCATATTGGTAAGGATCCCTTGGTATATCGCA
CCATTGGCCAGCAGTTGGAGCTATCTGCTTCGAATTTTGGGGATGTGGAG
GCGATTGTCTCCTGTCACGAGGGCAAGCGGTACAGCTTCAAAAGTTTGCT
ACAGGAAGCGGATGCGCTGGCGGCGGGTTTCCGGAAATTGGGCCTGCAGC
CAGGTGATGCCGTTGGTCTGTGGGCACCTAACTACTTGCACTGGTACTTG
GGCATGATGGGAGCAGCTCGAGCGGGTCTCACCTCGGTGGGTTTGAATCC
AGCTTACCAGGGACCCGAAATAGCCTACTGTCTGAATAAGGTCAATGTGA
AGGCCATCATTGCGCCGGAGACCTTCAAGACGCAGAACTACTATGAGATT
TTGAGAGATATCTGCCCGGAAATCTCAGATGCGGATACTGGCAAGATCCG
GAGTGAGAAGTTTCCGCACCTGCGATCCGTAATCATTGATAGCAACGATA
GCCTGAAGGGTGCCCTGCGCTTCGATGACTTCCTGGACCTGGCCAGCAAA
TCGGAGCGCGAAGAGGTGGCCAAAATGCAGAAGAGCATTCTGCCCGAGTC
TGCGTGCAATATTCAGTTCACATCGGGAACCACTGGCAATCCCAAGGCTG
CCTGTCTTACCCATCACAATTTCGTCAACAATGGCATCCATGTGGGCAAT
CGCAACGAACTGGAGGGCGAGAGGATCTGTGTTCAGTGCCCATGTTCCAT
GCCTTCGGTGTGATCATCTCCATCATGGCTGCTCTGACCAAAAGGTGCCA
CCATGTTCCTAACCGTTGCCGGTTTCAGTTCCCAAGGACTCGCTGCAAGC
CATCGTCATGAAAGGTGTTCCGGTGAATCCATGGCACCACCAACCATGTT
ATGTGTGATTTGGTCCAACACACAAAATAAGCTACGGTTGCCCGCTGGGC
AAGAATTTAAAAAGCCGCTCACCGGAGGTGCCATGTATCCCGCAATGTAT
CAAGGA
UFO09725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:31:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12512-RA | 2054 | CG12512-RA | 180..1258 | 9..1094 | 4880 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:31:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5340002..5341001 | 1084..76 | 4230 | 97.3 | Minus |
2L | 23513712 | 2L | 5341985..5342055 | 79..9 | 355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:31:27 has no hits.
UFO09725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:47 Download gff for
UFO09725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12512-RA | 295..1282 | 9..999 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:53:51 Download gff for
UFO09725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12512-RA | 180..1167 | 9..999 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:54 Download gff for
UFO09725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12512-RA | 180..1167 | 9..999 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:54 Download gff for
UFO09725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5340081..5340997 | 80..999 | 98 | <- | Minus |
2L | 5341985..5342055 | 9..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:53:51 Download gff for
UFO09725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5340081..5340997 | 80..999 | 98 | <- | Minus |
arm_2L | 5341985..5342055 | 9..79 | 100 | | Minus |