UFO09728.5prime Sequence
1063 bp (994 high quality bases) assembled on 2011-09-19
> UFO09728.5prime
CAGTCGACATGGCGATGACTCTGAACATTGGCTCGATGAAGCTGACAAAG
TGGCAGCTGGCGCTCATCCTTGGAACTCCCCTGGCCATTGGACTGGGCAC
CTATGCGGTGAAGAGCTGGACGGCTGCGTCCAAGGAGTTGGACGGGGAGA
AGAAGAGACCAAAGGCCAAGATCGAGAAGCAGGCCATCTCCCTGGACGGC
ACCGCACCGGACCAGGAGCTAGAGCGCAATCAAAAGTCCGCTGAGCTGGG
CGAGAAGCTGTCGCCTCTTAAGGAGGCCAACAACTACAAGACGGAGGGTA
ACAACTGCTACAGGAATGGGAAGTACGATGAGGCCATTAAATTCTATGAC
AAGGCCATCGACAAGTGTCCCAAGGAGCACCGCACTGACATGGCCATCTT
CTACCAGAACCGCGCCGCCTCTTACGAGATGCTCAAGAAGTGGTCCAACG
TCAAGGAGGACTGCACAGCCTCGCTGGAGTTCAATCCTCGTTACGCCAAG
GCATATTATCGTCGTGCCCGTGCTCACGAAGCCACCAAGGATATGAACGA
GTGCTTGGACGATGTCACAGCCACCTGTATCCTGGAGATGTTCCAAAATA
ATCAAACTATCATGTTCGCTGACCGTGTGCTCAAGGAGACCGGCCGACTG
GACGCCGAGAAGGGTATGCGCAATCGGGTGCCAGTCGTGCCGTCGGCTTG
CTTCGTAAACACCTACACGCGTTCCTTCATCGCGGATCCGCTGCAGACCA
TGAAAGTCCCAGCCCCTAAATCCGATGCACCCCCAAAGGGTTTCCTGCGC
GCCCACCTCGCTTTCCTCGAGGAGAAGTACGAGGAAATTATTCCCGCCTG
CACCGAAGAGATCGAATCCTCCGAGGCCGAAGCACAGTACCAAGTGGAGG
CTCTGCTTATGCGGGGACTTTCCATCTGCTGTGCGGCTCCTATGTAGAAA
GCCAGCAAGACTTTGATGCTATATAGCTATTGACTATGCTGATCCCACTG
TCAGCAGATGCATGCTGCAGACTATCGTACCGTAGCAGCTCGTCGAGACG
TAGGCACGTGATG
UFO09728.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:31:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tom70-RC | 2297 | CG6756-RC | 260..1250 | 9..997 | 4860 | 99.5 | Plus |
| Tom70-RB | 2237 | CG6756-RB | 181..1171 | 9..997 | 4860 | 99.5 | Plus |
| Tom70-RA | 2218 | CG6756-RA | 181..1171 | 9..997 | 4860 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:31:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12037166..12038130 | 972..9 | 4745 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:31:34 has no hits.
UFO09728.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:48 Download gff for
UFO09728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom70-RC | 77..1080 | 1..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:54:49 Download gff for
UFO09728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom70-RA | 174..1177 | 1..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:59 Download gff for
UFO09728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom70-RA | 174..1177 | 1..1005 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:59 Download gff for
UFO09728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12037155..12038134 | 1..982 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:54:49 Download gff for
UFO09728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12037155..12038134 | 1..982 | 99 | | Minus |
