UFO09731.5prime Sequence
1117 bp (975 high quality bases) assembled on 2011-09-19
> UFO09731.5prime
CAGTCGACATGATATCGTTTCTGTTAAAACGCCGAGCTTGTGATGCTTAC
AAGATTTCATTAGGACTAACTCGTGCATATAGAGCCTTAACAGAAGTAAA
AAGCCTTCAAAATGCCTTACGACCTGGTAATAAAACTGGAAATATCAAGC
TGGTAAACATATACCGAACTTCTAGCATACAAAATGTGAAGAAGAACCAA
CTAAGTGACGCTGAAAGCGTTATTCCACTCTTATTGCGGCCAGCCAAACC
TGTGCTGATTATGAGAGAAGGATCTCAAACCGATTGTAACGACGATTTGC
TGTCCTCTGAGCAAAGAGCCAAAAAAAGGGAAAGCATAAAAAAATCCGAA
GTAGATTGCCCAAAATTTCCAGCTGAGAAACTTCCGCCCACAACGAAATT
TCCTATTAATGAAAATGCCAAGAAGGTTTTAGATCCAGCCGACCAAAGAG
AACTCGAGGCCAATTTGTTAAAAAGGCTTAAAGATATGGCTAAAAGAAAG
AAATCTCGACTAGATGAGAAAGTTGACGAGCTGAGGGATAATTTTATAGG
CTGGAATTATGCTGCTCTACAAGGAAGAACTATTGTGACTGTGGATGCCA
AGGAATCAACTCCACCGAAAGGATCTGGGCCGGCCACCCCGGCAGGCTCT
CCTCCACCTAAAAATGTTTCTGCACCGCCGACGGGCGGTTCTCCGCCTGC
CAAAAGCGGCGCTCCACCACCCCCAAAGGGGCCACCGCCCGGAACTCCAC
CACCGCAGACGAAAACTACTTTTGGACCACTTGCTGATGCTGATCGAATC
TTTACCAATTTATACGGACGGCACGATTGGCGATTGAAAGGCAGCAATGA
AGCGCGGTGACTGGTACAAGACGAATGGAGATCATAGCCAAGGGTGCCAA
GTGGATAGTCAACGAGATTAAGACATCTGGACTGCGAGACGCGGTGGCGC
CGGATTTCCCAGTGGAACTTAAGTGGTCATTTATGCATAAACCGCCTGAT
GAAGAACCAAGTTTCTGGTAGGTCAATGCGGAATGAAGAAAGCCGTACTT
GCAAGATCGTGAGAATAATGCCCCATGATCCACACAACTGGATAAGGGAT
GTCTCAATTGCCTGACG
UFO09731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:31:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11423-RA | 2143 | CG11423-RA | 17..1116 | 8..1106 | 5110 | 98.3 | Plus |
| CG9140-RB | 1553 | CG9140-RB | 133..518 | 732..1117 | 230 | 73.1 | Plus |
| CG9140-RA | 1590 | CG9140-RA | 170..555 | 732..1117 | 230 | 73.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:31:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17595283..17596382 | 8..1106 | 4845 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:31:37 has no hits.
UFO09731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:49 Download gff for
UFO09731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11423-RA | 17..1126 | 8..1117 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:55:16 Download gff for
UFO09731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11423-RA | 17..1126 | 8..1117 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:59 Download gff for
UFO09731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11423-RA | 17..1126 | 8..1117 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:59 Download gff for
UFO09731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17595283..17596378 | 8..1102 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:55:16 Download gff for
UFO09731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13482788..13483883 | 8..1102 | 98 | <- | Plus |
