UFO09733.5prime Sequence
1104 bp (982 high quality bases) assembled on 2011-09-19
> UFO09733.5prime
CAGTCGACATGTGGAGGCACACGATCCAAAGTACCAGGTACCTGGCAGGA
AACGCCTCGCTTTGCAGGCAAATAGCGACGCACAGTCCCAAACTGGGGGC
GGAAAGCAATCGCAGCAAGGAAAAGGCAAGTGAGAATGAGTCCTTTATGG
CCAACATCTTCCGTGGATCACTGGTGTCAAGCCAAGTGTTCCCGTATCCG
GATGTCCTGACCGCGGAGCAGAAGGAGCTGACCAACAGCCTGATAGATCC
GTTCGAGCGTTTCTTCTCCGATGTCAATGACGCTGCCCGCAACGATGCCA
ACTCTAAAATAGATGACACCACTTCGACGGCTCTGTGGGAGCTCGGGGCC
TTCGGAATCCAAGTGCCATCTGAATTCGGTGGCCTCGGTCTGAACAATAC
CCAGTACGGCAGGCTGTGCGCCATTGTGGGTGTCAACGATCTGGGACTGG
GCATCACGATTGGCGCCCATCAGAGTATTGGCTTCAAGGGAATACTGCTG
TACGGCACCCCCGAGCAGAAGGAGAAGTACCTGCCCAAGGTGGCCGCCGA
GCAGGTGTACGCTGCCTTTGCCCTTACGGAACCCAGCTCCGGATCTGATG
CGGGTTCCATTCGATGCCGTGCCGTGAAGAGTGCCGATGGAAAGCACTAC
GTCCTTAATGGCTCAAAAATCTGGATTTCCAATGGCGGAATTGCCGAAAT
TATGACCGTTTTCGCACAGACCGAGCAGTGGACCCGAAGACTGGCGAGAA
GAAGGACAAGGTCACTGCCTTCATTGTGGAACGATCCTTCGGAGGTGTAA
CCAATGGACCACCGGAGAAGAAAATGGGCATCAAGGCATCGAACACGGCC
GAAGTGTATTTCGAAGATGTAAAGATTCAATTGGAAAATGTGCTCGGCAA
GGAAAGGTGATGGATTCAAGTTGCCATGAACATATTGAACACGGTCGGGT
TGGAATGGGCGCCCACGCTATCGGGAACATGAAGAATGCATCGAACACGC
CACGAGCATGCCAACATCGAGTCAGTTTGTTCAAAACTAAGAACTATGAT
CATCAAGAAAATTGCTCAGAATGAACATTAGCAGTACGCCACGAGTGATT
GGCT
UFO09733.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:31:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7461-RC | 2274 | CG7461-RC | 53..1150 | 9..1093 | 4925 | 97.7 | Plus |
| CG7461-RB | 2013 | CG7461-RB | 53..1150 | 9..1093 | 4925 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19305224..19306235 | 9..1016 | 4595 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:31:44 has no hits.
UFO09733.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:51 Download gff for
UFO09733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 62..1170 | 9..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:56:16 Download gff for
UFO09733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 53..1161 | 9..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:02 Download gff for
UFO09733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7461-RB | 53..1161 | 9..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:02 Download gff for
UFO09733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19305224..19306332 | 9..1104 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:56:16 Download gff for
UFO09733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15192729..15193837 | 9..1104 | 97 | | Plus |
