UFO09738.5prime Sequence
1072 bp (981 high quality bases) assembled on 2011-09-19
> UFO09738.5prime
CAGTCGACATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAA
CTGATGCTCTTCGAAGCCGCCGGCGAGGGGACCATTGTAGAGGGTAGCCG
GATATGCGGCCAGGATGCGGATCCGCTCTCCTTGCCGCTGGTGGAGGACG
GCGCCATCGAGGAGGAGCAGGCGGCCCCCATACAGACGATTCATCGCACT
GTATTCGCCGTTCCACGCGTCCCTTCCCCCTCCCCCGTAAGCACATCAGG
TGCCAATCTGAACCTCAAGACGGAAAACGCTGCGACAGCGACTCCGCAGC
GCAAAATATCGACGTCATCACGTTTCATGAACGCCTTCAGTCAGCTCTAC
GGCGGCGGCAACAGCGGTCCGAGCTGCGGTCACGTGGAGCAGCACAACGA
GGAACCCGGTGACCTGTCGGCAAACCGTACTCCCACCAAGGGCATGGAGT
CCAAGCTCGTCGCAATGTGGCACAATGTGAAGTATGGCTGGAGCGGCAAG
ATGAGGCAGACCAGCTTCTCAAAGGAGCAGCCCGTGTGGCTGCTAGGACG
GTGCTATCATCGACGCTTTACTCCGCCCGTAAGCATGGAAAGTTCCATCA
CCGAGCTGCCCAGCGGGGCGGATACCACCCCCGATAACGCCACATCGGCG
TTCGACAGCATTCAGGCCACATCGACATCAACCTCCTTGTATCCAGCCCT
TAATCCGCAGCAGATCGATGAGATTGTGGTGCCCCAGGAACTGGGAATGG
ACGCGGTGGAGAACCAAGTGGGCGAACAGCCTTGGGAGGAGGGCATCGAA
GGCTTTCGTCGTGACTTTTACAGTGGATTTGGGATGACCTACCGTCGAGA
GTTCCCAATAATGAATGGCTCCAACTACACCTCGGACTGCGGTTGGGGCT
GTATGCTAAGGAGTGGTCAGATGCTCTTCGCTCAGGACTCATCTGTCACT
TCTAGGCGAAGCTGGCGCTATGATCAGAGTCCAGTTTCATCGAGCACTTA
CGAGACATATGCATAAGAAGATCGTCAGGTGTCCGGTACGTCCTCAAAGG
CAGTCCCTTCTCAATCCAGCCT
UFO09738.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:31:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg4b-RA | 2665 | CG6194-RA | 109..1178 | 9..1068 | 4860 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:31:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15355684..15356628 | 952..9 | 4615 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:31:57 has no hits.
UFO09738.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:54 Download gff for
UFO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6194-RA | 104..1177 | 9..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:58:19 Download gff for
UFO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6194-RA | 109..1182 | 9..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:09 Download gff for
UFO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg4b-RA | 109..1182 | 9..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:09 Download gff for
UFO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15355674..15356635 | 1..960 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:58:19 Download gff for
UFO09738.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11181396..11182357 | 1..960 | 99 | | Minus |
