UFO09741.5prime Sequence
833 bp (806 high quality bases) assembled on 2011-09-19
> UFO09741.5prime
CAGTCGACATGTTAAAGTTTATCAGAGGAAAAGGGCAGCAGCCCAGTGCT
GACAGACAACGCTACATCACGGCACAGCATGGCTTTCCTCATAAGCCTTC
GGCTCTTGCGTATGATCCAGTTTTGAAACTTATGGCAATAGGGACGCAAA
CAGGGGCTTTAAAAGTTTTCGGTCAACCCGGAGTTGAATTGTACGGTCAG
CATACTTTGTTAAACAATTCAGCATCGGAGCTTAATGTACAATTACTTGA
ATGGGTGTATGGAACTGGTCGCATACTTTCGTTGACGGCAGCGAATCAAT
TAATTCTATGGGAGCCAGTTGGAGCAACGTTGCTGCCAATCAAAACACTA
CCGTTTGACGGCAAACTTAAAAAAGTTTCATCGCTGTGCTGTTCTCTCAG
TAAGGATCTGCTATGGATTGGAACAGAAGGTGGAAACATCTATCAACTGG
ATTTACATACATTTACCATTAAGGAGCCTGTAATTTACCATGACGTTGTG
CTAGAGCAGGTGCCACCAGCCTACAAGCTAAATCCTGGTGCAATTGAGTC
AATCCGCCAACTTCCAAACTCCCCTAGCAAACTTCTAGTTGCATACAATC
GCGGCCTTTGTGTTTTGTGGGATTTTGAAAGCGCATCTGTCCAGCGAGCA
TACATAGCCCCTGGACATGGACAGAGCGTTGGTCTTACAGTGAACTTCGA
AAGGATCTGAATTTACCTGGTACCACGCTGATGGTTCATACGCCACTTGG
AGCATAGATAACACAATCCACAGCTCCTGTCATCTCACTGACATACTTAT
GACCAATCTCATAGATACGAGAGCCAAGGTTAG
UFO09741.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:32:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)gl-RB | 5155 | CG2671-RB | 317..1070 | 8..762 | 3750 | 99.9 | Plus |
| l(2)gl-RF | 5082 | CG2671-RF | 239..997 | 8..762 | 3690 | 99.2 | Plus |
| l(2)gl-RE | 5225 | CG2671-RE | 382..1140 | 8..762 | 3690 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:32:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15019..15711 | 762..69 | 3420 | 99.9 | Minus |
| 2L | 23513712 | 2L | 19885..19945 | 68..8 | 305 | 100 | Minus |
| 2L | 23513712 | 2L | 17083..17136 | 62..9 | 255 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:32:09 has no hits.
UFO09741.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:55 Download gff for
UFO09741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)gl-RB | 309..1074 | 1..769 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:59:50 Download gff for
UFO09741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)gl-RB | 313..1078 | 1..769 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:15 Download gff for
UFO09741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)gl-RB | 313..1078 | 1..769 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:15 Download gff for
UFO09741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15011..15711 | 69..769 | 99 | <- | Minus |
| 2L | 17075..17136 | 9..68 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:59:50 Download gff for
UFO09741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17075..17136 | 9..68 | 91 | | Minus |
| arm_2L | 15011..15711 | 69..769 | 99 | <- | Minus |
