UFO09747.5prime Sequence
1116 bp (1018 high quality bases) assembled on 2011-09-19
> UFO09747.5prime
CAGTCGACATGGACGAGCGGGAGAGTCTGTACTTCGACACCATATCGCTG
GCGGAATCGGAGGCGGCGGCTGCTGCGGCGGCGCATCGCAAGTCGATCTC
GCAGTCGCGCAACACCATCTACCACTCGGCGGTCGATCTGGCGGGCGATG
AGGGAGGCGGAGGAAGCGGTGGAGGAAGGCTGCGTCTGGGCGGCGGAGCA
GCCGCCGAGCACGCAGCGCTTGCCTGGCAGCCTGGATACCGTCAGTCCAC
AGCACTGGAGCACCTCAATGGCGGCGGTGGTGGTGGTGGTGATCACACGG
ATGCCGCTATCGCCGCCCAAATGATTGCCCTGCAAAACGGACGAAACCAC
CTGCCCACCGGGATCGGTGTGACCGGAGATGGAGGACAAGGAGGTGGTGA
CGATGAGACATACAGACGCTTCGACGATGGCAAACGGAGCGTGGACTTTG
TGCTGGCTTACAACGGAGAGACGCAGCTGGAGGAGCATCGGCGCAAATGC
GAGATCTTTGAGGCGAATCTGCAGCGAGAGGGCTTGCAGCTGGAGCACAA
CAAGGTGCAGCGCGTCCATTTCATCAAGATCCATGCGCCGGCGGAGGTGC
TGTACCGCTATGCGGAAATACTCAAGATTAAGGTGCCGCTCAAACCGATT
CCCGGCCAGGATCAAATCTTCGCCGAATCGGCGCACGAGTTCAAGACCTG
CTTCAGTCGCATGTGCAAAAGTCTCTTCAGCTCCGTCCAATTGAATACGG
CCCTGTTTCCCGGAACGCGAACCGCGCATCCATCTGGAGTTCTCCCGCAA
CTACCTGGAACTGTACGATACGGAGCACCCGAACTTTCTCGACGCCAGCA
CCCGCTACTCCATCATCAATTTCATTCTCCAGCGCCAGCGTTTCGTGAGG
GCGAGGAGACGCCCGACATCTGGGCATCGAGAGCTCGTCCAGATGCGTAT
ATACCTGCGCTACACCTTGCATGATAAGACGATCGCGATCGCTGCTAAAG
GAGTGGGCCAACATATCCAGTTGAGACTGTCAACCACTGGACACTAAAGA
CCTACTTGAGCAAGGTGGCACTCACTTTGGCTGCTGGATTCCACGCATGC
TGATCATTACGGGTTC
UFO09747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:31:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10353-RK | 4482 | CG10353-RK | 522..1639 | 9..1104 | 4890 | 97.1 | Plus |
| CG10353-RI | 4771 | CG10353-RI | 811..1928 | 9..1104 | 4890 | 97.1 | Plus |
| CG10353-RC | 4203 | CG10353-RC | 243..1360 | 9..1104 | 4890 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:31:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11881330..11881904 | 975..406 | 2505 | 98.1 | Minus |
| X | 23542271 | X | 11883188..11883586 | 407..9 | 1995 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:31:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 3346..3408 | 1113..1051 | 117 | 65.1 | Minus |
UFO09747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:52 Download gff for
UFO09747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10353-RC | 230..1343 | 1..1094 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:57:18 Download gff for
UFO09747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10353-RC | 233..1346 | 1..1094 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:04 Download gff for
UFO09747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10353-RC | 233..1346 | 1..1094 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:04 Download gff for
UFO09747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11881330..11881902 | 408..975 | 98 | <- | Minus |
| X | 11883188..11883591 | 1..407 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:57:18 Download gff for
UFO09747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11775363..11775935 | 408..975 | 98 | <- | Minus |
| arm_X | 11777221..11777624 | 1..407 | 99 | | Minus |
