UFO09756.5prime Sequence
1091 bp (993 high quality bases) assembled on 2011-09-19
> UFO09756.5prime
CAGTCGACATGGGAGTTCCAGCATTCTTTCGCTGGCTGAGCCGGAAGTAT
CCATCCGTGATAATAGAATGCAATGAAAACAAGCAGGTGGACGCGGACAC
CGGTCGAAACATCTACGAGGACCCCACCTTGCCGAATCCAAATGGGATAG
AGTTTGACAATCTGTACCTGGACATGAACGGCATCATCCATCCGTGCACG
CATCCGGAGGACAAGCCGGCGCCGAAGAACGAGGACGAGATGATGGTGGC
CATCTTCGAATGCATCGACCGTCTGTTCGGTATTGTACGTCCTCGAAAAC
TGCTCTATATGGCCATCGATGGCGTTGCTCCACGAGCCAAGATGAATCAG
CAGCGATCTCGTCGCTTCCGAGCGGCCAAGGAAACCACCGAAAAGCGGCT
GGAGATAGCACGGATCCGCGAGGAGCTGCTGAGCCGCGGCTGCAAGCTGC
CACCGGAGAAGGAGAAGGGTGAACACTTTGACTCCAACTGCATCACGCCG
GGCACCCCGTTCATGGACCGACTGAGCAAGTGTTTGCACTACTTTGTTCA
TGATCGTCAAAACAATAACCCGGCCTGGAAGGGCATCAAGGTGATCCTGT
CGGACGCCAATGTGCCCGGTGAGGGTGAGCACAAGATCATGGATTACATT
CGCAAGCAGCGTGCCCAGCCTGATCACGATCCCAACACGCAGCACGTCTT
GTGCGGAGCCGACGCCGATCTCATCATGTTGGGTCTGGCCACGCACGAGC
CCAACTTCACAATCATTCGGGAGGAGTTCCTGCCGAATAAGCCGCGTCCC
TGCGACATCTGCAACGGATTTGGCCACGAGATGGACAAGTGTGTCGGACT
CGGAGCGACTGCGCCAACTAGCGCCAATTTTAAGCCCGATGTGCCCATAG
CGCCGAGGTAAAGTTCATCTTTGTGCGGCTGAGTGTGCTACGCGAGTACC
TAAAGCAGACTCTTGAGATGCCGATCTGCATTTGAGTACAGTTTCGGGCG
CGCGTGACGTATGGGTGTCATGTGCTTCTTTGGTGGCAATGAATTTCTGC
CCACTGCCCTAGCTGCAATCCGAGGTGCAGTAAATCGATTT
UFO09756.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:32:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rat1-RB | 2975 | CG10354-RB | 84..1133 | 9..1052 | 5020 | 98.9 | Plus |
| Rat1-RA | 3341 | CG10354-RA | 84..1133 | 9..1052 | 5020 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:32:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6908166..6909215 | 9..1052 | 4895 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:32:50 has no hits.
UFO09756.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:04 Download gff for
UFO09756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rat1-RA | 80..1141 | 9..1063 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:05:33 Download gff for
UFO09756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rat1-RA | 84..1145 | 9..1063 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:31 Download gff for
UFO09756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rat1-RA | 84..1145 | 9..1063 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:31 Download gff for
UFO09756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6908166..6909227 | 9..1063 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:05:33 Download gff for
UFO09756.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6908166..6909227 | 9..1063 | 98 | | Plus |
