UFO09765.5prime Sequence
1080 bp (983 high quality bases) assembled on 2011-09-19
> UFO09765.5prime
CAGTCGACATGTTGCGTCTGATTTGCGTGTTCCTGCTCAGCTGCGTTGGC
TTCCAGGCAGCCTTGGCTTGCAATGGCTACAAAGCCAAGCTGGTCAAGTT
GGAGAACTGTGCCGGCGAGGATGCCATTATGACGGTGGGCAGTGACTTCA
GCCTGAAGCTAAACAAGAAGTGTGAACTGGTACCCTCGGGCTGCATCATG
AACAAGCCGTTCAGTACCGCGGTGGCTAAGTTCAAGGTCCAGAAGGATGG
CATCGTAATGAAGGAGGGCAAGATCGATCTATGCGCCGCCATTGATCAGG
CCTCCTCCGAAGGTAAGGACATGCTAAAGCTTTTCGGAGCACCTTCCTCC
TGTCCGGTGGGCGAGGAGAAGGTGTGCGCCAACGATCACTCCGTGGATCT
GAGCAAGTACAAGGCCATGTTGGGCATGGCTCGTGGTCACCTCATCATCG
ATTCTGAGGTCAAGCATGACACGGGCAAGTCCTGCATTCATGCCGAAATC
GAGATCACCAAGAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGATGAAAC
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTAAATCAAACTGGTGAA
CTCACCCAGGATGCTGAACGAAAACATATTCTCATAACCTTAGAATAGCA
GCTTCACCGTACACGCCACATCTGCCAATAATGTGTAGACCTGCCGATCG
TCTGTATTCACTCCGAGAGCGAGAAACGTT
UFO09765.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14277-RB | 825 | CG14277-RB | 182..688 | 9..515 | 2535 | 100 | Plus |
| CG14277-RA | 679 | CG14277-RA | 36..542 | 9..515 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8242783..8243185 | 72..474 | 2015 | 100 | Plus |
| 2L | 23513712 | 2L | 8242667..8242729 | 9..71 | 315 | 100 | Plus |
| 2L | 23513712 | 2L | 8243247..8243289 | 473..515 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:33:02 has no hits.
UFO09765.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:07 Download gff for
UFO09765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14277-RA | 5..515 | 1..515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:07:14 Download gff for
UFO09765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14277-RA | 32..542 | 1..515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:34 Download gff for
UFO09765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14277-RA | 32..542 | 1..515 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:34 Download gff for
UFO09765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8242663..8242729 | 1..71 | 94 | -> | Plus |
| 2L | 8242783..8243184 | 72..473 | 100 | -> | Plus |
| 2L | 8243248..8243289 | 474..515 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:07:14 Download gff for
UFO09765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8242663..8242729 | 1..71 | 94 | -> | Plus |
| arm_2L | 8242783..8243184 | 72..473 | 100 | -> | Plus |
| arm_2L | 8243248..8243289 | 474..515 | 100 | == | Plus |
