UFO09766.5prime Sequence
1122 bp (1028 high quality bases) assembled on 2011-09-19
> UFO09766.5prime
CAGTCGACATGAAGGCCTTGCAATTCGCTCTTGTATTTTCGGCCATTCTG
GCCATTGCCTTCGCTGCAAATGCCAGTTGGGGAGCCAAATTGTCCAGCAG
TAAGTTGGTCAGCACTCAGAACGTGACCATCTACAAGAAGGCCAACCAAT
ATGTGAGCAGTCTCATCAGTTTCCCACTGGCGGGCCAGAGCAACACTAAA
ACCATTCGGTACATTAGCATAACTGATAGGTTTACCAACAGTTCGGGACC
TTACTCCACCTTGTGGTCCGGTGGACCAGGATTCATCAATGCCCAGGTCA
ATGTCACAAGCCAGTTTTCTCAAGGAATCAATGTAACTGCTCAATTTTGG
GTGGATGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCC
GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCA
TCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGG
GCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACT
CACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAG
GGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGAATATATGT
GTAGAAACTGCCGGAAATTCGTCGTGTATTCACTCCAGAGCGATGAAAAC
GTTTCAGTTTGCCTCATGGAAACGGTGTAACAGGTGACACTATCCATATC
ACAGTGTCACGTCTTTCATGCATACGAAATCCGGATGAGCATTCATCAGG
CGGCAGAATGGTGAATAAGCCGAATAAACTTGGGCTATTTTCTTACCGCT
TGAAGCCGTATATTCAGCTGAA
UFO09766.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31789-RC | 695 | CG31789-RC | 15..365 | 9..359 | 1755 | 100 | Plus |
| CG31789-RB | 472 | CG31789-RB | 15..365 | 9..359 | 1755 | 100 | Plus |
| CG31789-RA | 534 | CG31789-RA | 15..365 | 9..359 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18606177..18606354 | 182..359 | 890 | 100 | Plus |
| 2L | 23513712 | 2L | 18605942..18606116 | 9..183 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:33:06 has no hits.
UFO09766.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:07 Download gff for
UFO09766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31789-RA | 1..358 | 9..366 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:07:43 Download gff for
UFO09766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31789-RA | 15..372 | 9..366 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:35 Download gff for
UFO09766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31789-RA | 15..372 | 9..366 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:35 Download gff for
UFO09766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18605942..18606115 | 9..182 | 100 | -> | Plus |
| 2L | 18606178..18606354 | 183..359 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:07:43 Download gff for
UFO09766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18605942..18606115 | 9..182 | 100 | -> | Plus |
| arm_2L | 18606178..18606354 | 183..359 | 100 | == | Plus |
