UFO09776.5prime Sequence
1051 bp (815 high quality bases) assembled on 2011-09-19
> UFO09776.5prime
CAATCCACATGACGATAAAATCGTTCAACTTGGTGGTAAAGGGTCCCATG
TGGGGCGTTCGCCACCTGCAGGTACTGTTCCTCTTTCTGTGCGCCACCTT
GATCGTGGCCCAAAGGTTCAACATGAGCGTGGCCATTGTGGCCTTTACGA
ATGCCAATAGCAGCAACCCAAATTATCCGGAATACCGACTGACAGAGCCT
CAGAAGTCGTACACCATCAGCAGTCCCTTCTGGGGCTCCTGCTGCACCCA
AATGATGAGTGGATACCTATCGAGTCGCTTTGGAGCCAAGGTGCTGCTGC
TGACCATCATGTTGCTCACCGCTCTGCTCAGCATTGCCACGCCCTTCGCC
TTGGCCTGGGGCGGCTGGCAGCTGCTCTTCTGGGTGCGATTCGTCCAGGG
ACTCGCCATGGGCGGCATGTGGCCCTGCCTGTACACCCATCTGGCCAAGT
GGTGTCCCAAGAAGGAGGCCAATCGCATGGGCGGCATCATGACCACTGGC
TTGGATTGTGGGACAATAATGGGATTCGCTTTGAGTGGCGTACTCTCTGC
ATCGCCCCTCGGGTGGCCCAGCACATTCTACGTGCCAGGATACATAGGCA
TCGTGTGGTGCCTTACTTTCTTGCGATATGGCGCCAACAGCCCATCCGAA
TCGAAATTCATTTCTCTGGCGGAACGAAAGCACATTCAATTTGCCCTCGA
GCAGAATCAGGTGATTCGCGGTGCAACTCCTCCAGTACCGTGGCTCCAGA
TCCTCACCTCTCGTCCATTTATCGTCCTGGCGTTGTGCAAATGAGCCAGG
CGTGCAGCTTCTACACGCTGATGCACAGATTCCGCGCTACATCCACTGTA
TATTCCACTACAGCATTGCGGCAATGCCTGCTCTCAGCTCTGCCCTTTGT
GGTCATGCTGATGTCATCCTACGGATTCATTTTCGTGTCTGATAGCTGAC
CCGTCGTCGAGACATTGCATGCCTATCCGTACGGATACCATTCAGTCTTT
GCCACATGGAGCCCTGCATGTAGCCCTGGTTATCTATGCTACGTTCAAGG
A
UFO09776.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3649-RB | 1569 | CG3649-RB | 41..1083 | 9..1044 | 4725 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22846112..22846659 | 42..589 | 2710 | 99.6 | Plus |
| 2R | 25286936 | 2R | 22846910..22847364 | 586..1034 | 1630 | 94.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:29:24 has no hits.
UFO09776.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:21 Download gff for
UFO09776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3649-RB | 11..1062 | 1..1050 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:36:16 Download gff for
UFO09776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3649-RB | 35..1086 | 1..1050 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:55 Download gff for
UFO09776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3649-RB | 35..1086 | 1..1050 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:55 Download gff for
UFO09776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22846113..22846658 | 43..588 | 99 | -> | Plus |
| 2R | 22846913..22847378 | 589..1050 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:36:16 Download gff for
UFO09776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18733636..18734181 | 43..588 | 99 | -> | Plus |
| arm_2R | 18734436..18734901 | 589..1050 | 94 | | Plus |
