UFO09778.5prime Sequence
1087 bp (988 high quality bases) assembled on 2011-09-19
> UFO09778.5prime
CAGTCGACATGTCGACAAACCCAAGTCCGCAGCGGCAACAGTCCGAGGAC
GTTCAGATCTCGATGGCCAGTTCCGGAGGAGGAGCCGGCAATGGCGTTCC
GGATAGACTGCCTCCGATCAACGTAAAGGACCAACGCTTCCCCTACTGCA
TCGTTTGGACTCCCATTCCGGTTCTCACCTGGCTGATGCCCATGATCGGA
CATATGGGCATTTGCACTTCGTCCGGTGTGATTCGTGACTTCGCCGGCCC
CTACTTCGTATCAGAGGACAACATGGCCTTTGGAAGACCCACCCGGTACA
TAAGGTTGCACCCCAAGCACATGGTGGGCGGCAGTTACGCCTGGGACGAG
GCGGTCTCCAAAGCATCTGTGCTCTACGGCACCCGCATCCACAATATCTT
CTGTGACAACTGCCACTCGCATGTGGCAACGGCACTCATCTACATGCGCT
ACTACGACAGCACCGCATGGAACATGATTATCCTCAGCATGTGGCTCTTT
GTCTGCGGCCGCTACGTCGGAATAGGGGGTTTTATTAAGACCTGGCTGCC
GTTTGCCATTCTCCTGTCCATCTTCACCATTCTGGGCATCTATTTTGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGTATTCTGCCGACATGGAAGCCA
TCACAAATCGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCTTGCGTATATATTTTGCCCATGATGAAACGGGGCGAAGAAGTTGTCC
ATATTGCCACGGTTAATCAAAACTGTGAAACTCACCAGGATGCCTGACAA
CGAAACTATTCTCAATAACCGTTAGAAAGCAAGTTCA
UFO09778.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:29:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-RB | 864 | CG8372-RB | 194..781 | 9..596 | 2940 | 100 | Plus |
| CG8372-RA | 790 | CG8372-RA | 137..707 | 26..596 | 2855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:29:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8212122..8212709 | 596..9 | 2940 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:29:30 has no hits.
UFO09778.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:22 Download gff for
UFO09778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 173..767 | 9..604 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:37:21 Download gff for
UFO09778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 194..788 | 9..604 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:57 Download gff for
UFO09778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 194..788 | 9..604 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:57 Download gff for
UFO09778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8212115..8212709 | 9..604 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:37:21 Download gff for
UFO09778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8212115..8212709 | 9..604 | 99 | | Minus |
