UFO09796.5prime Sequence
951 bp (878 high quality bases) assembled on 2011-09-19
> UFO09796.5prime
CAGTCGACATGTTGCAAATCTTTAAATTCCTGTTAAAATCCAGCAAATCT
ACCGGTCGTGCCCACTTCCGGCCCACTTTTCTGGACACACTGCGCCTAGC
GGTTCGTGGAGGACATGGTGGAAATGGACTGCCCAAATACGGAGGAGTTG
GTGGCCAAGGCGGTTGCGTCTACTTGGTGGCAAAGGAAGGACTCACCCTT
CGCAAGGTCGTCCAGGGATTGAAGGATAAGCGAGTGGCAGCATCCAGTGG
CGAGGACAGTAGCAAAGCCAGCATCTTTGGACGCCGTGGAGCTGACCAGA
GGATCGAGGTGCCTGTGGGCGTCCAGGTATATGACGACCAACAAAAACTC
ATCGCCGACCTCTACGAGCACGAGGCGACATGCATTGTGGCGGGCGGAGG
TACTGGCGGATGCACGGCCACAAATTTTCTGGGACGTCCCGGGGAGAATC
GCACTGTAAATCTGGACCTAAAGCTAATAGCAGATGTGGGTCTCGTGGGA
TTCCCCAACGCTGGCAAAAAGCACCCTTCTTAAGGCCGTGTCCAATGCCA
AACCAAAAATTGCAGCTTATCCCTTTACCACCATCCGACCCCAGATTGGA
ACCATCGAGTACAGGGACCTGCGCTCCATCACAGTTGCCGATCTTCCCGG
TCTGATCGAGGGCGCCCACGCGAACTTCGGCATGGGTCACAAGTTCCTGA
AGCACATCGAACGCACCCGCCTGCTGGTCTTCATGGTGGATAATATTCGG
CTTCCAGCTGAGTCCAAACATCCCGCATCCGCGACTGCTTGGCCAATGTG
TATGCGCTCAACAAAGTGTTGGAGCTCCTACCGATTCAATTCGCTGCTGG
AGAAGCCCAGTGTTCCTGCTGCTTGAACTGAATGGGACAAGGGAGGGTGG
CCCAACGAAATCTTTTACCAAAGCTTAGCCGCTCGGTACAGCGATATTGG
G
UFO09796.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:30:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10628-RA | 1254 | CG10628-RA | 43..955 | 9..935 | 4115 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:30:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19757950..19758472 | 574..51 | 2555 | 99.6 | Minus |
| 2L | 23513712 | 2L | 19757609..19757891 | 863..575 | 1080 | 94.8 | Minus |
| 2L | 23513712 | 2L | 19758532..19758573 | 50..9 | 195 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:30:04 has no hits.
UFO09796.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:13:29 Download gff for
UFO09796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10628-RA | 34..934 | 1..915 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:42:19 Download gff for
UFO09796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10628-RA | 36..936 | 1..915 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:17 Download gff for
UFO09796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10628-RA | 36..936 | 1..915 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:17 Download gff for
UFO09796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19757563..19757891 | 575..915 | 94 | <- | Minus |
| 2L | 19757950..19758472 | 51..574 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:42:19 Download gff for
UFO09796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19757563..19757891 | 575..915 | 94 | <- | Minus |
| arm_2L | 19757950..19758472 | 51..574 | 99 | <- | Minus |
